Eremothecium cymbalariae: Ecym_5549
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Entry
Ecym_5549 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
erc
Eremothecium cymbalariae
Pathway
erc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ecym_5549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erc03000
]
Ecym_5549
03021 Transcription machinery [BR:
erc03021
]
Ecym_5549
Transcription factors [BR:
erc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Ecym_5549
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Ecym_5549
RNA polymerase III system
TFIIIB
Ecym_5549
RNA polymerase I system
SL1/TIF-1B
Ecym_5549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
11468635
NCBI-ProteinID:
XP_003647106
UniProt:
I6NDZ7
LinkDB
All DBs
Position
5:complement(1113088..1113807)
Genome browser
AA seq
239 aa
AA seq
DB search
MSDDKRLKEFQEQNKIVFDPSTRSVWENQDKDSGIGNMINAPRERDESKSIIDGDNGATS
GIVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM
VVTGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGT
FSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgataaacgtttgaaagaattccaggagcaaaacaaaattgtattcgatcca
agcacaaggtctgtatgggagaaccaagacaaagattctggcatcggtaatatgataaat
gctccacgtgaacgggacgaatcgaagagcataattgatggagataatggtgcaacgtcg
ggaattgtacctactttgcaaaatattgttgcgactgtgaatttggattgtcggttagat
ctaaagactgtagcgttacatgcacggaatgcagaatataatcctaagcggtttgctgct
gttattatgcgtattagggaaccaaagacaacagccttgatttttgcgtccggtaagatg
gttgtgactggtgctaagagcgaggatgattccaaattggctagtcggaagtacgctagg
attatccagaaaattgggtttagtgccaagttcacagatttcaagattcagaatattgtg
gggtcctgtgatgtcaagtttcctattcgtcttgaaggtttggcttttagccatggtact
ttctcatcttatgagcctgagttgtttcccgggttaatttatagaatggttaaaccgaag
attgtgttgttgatatttgtttctggaaagattgtgttgactggtgccaagcagagggaa
gaaatttaccaagcgtttgaagctatatatccagtgctaagtgaatttcgaaagttgtaa
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