Eremothecium cymbalariae: Ecym_5574
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Entry
Ecym_5574 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
erc
Eremothecium cymbalariae
Pathway
erc03015
mRNA surveillance pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ecym_5574
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_5574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_5574
03041 Spliceosome [BR:
erc03041
]
Ecym_5574
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Ecym_5574
mRNA cycle factors
Stress granule specific factors
Ecym_5574
Spliceosome [BR:
erc03041
]
Complex C
Other components
Complex C specific factors
Ecym_5574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
11472081
NCBI-ProteinID:
XP_003647129
UniProt:
I6NE20
LinkDB
All DBs
Position
5:complement(1175694..1178309)
Genome browser
AA seq
871 aa
AA seq
DB search
MQVEAMGIKKAEDIKLAEELDMFMVLEEGENQEQLRGSGMEVLDGGAIEVKEKDLNNGGG
SKRKRGGRVVDGGVTDGSSSGLGGGCGGVLGRHQEEEFCGPKSNTPNSQLEQLENTNLLT
VRIKWVNPENLMDDHKSQLLNKHNDAILYNRGLPINPSIIENYEYFSDKKRLDILKENED
TYTFEAGTQEYAKSYAKDSNTWLYDLVVQAQFKTFQDLVNTRNTVKELLESNKHVKAWSI
SQNPHALTHPGNLYIRGIPKDLTVDDVLPLFSKFGTVLSLKIIVDIGTGESLGYGFISYP
LGSQAARCIKELNGNLMNGSLLFINYHVERKERERIHLDHLKEDNDDERFRGVFVGNLPT
EYEDGTLTTPEQVFKKFKELLDPVEILSYYFPKRNSNTNIEYKDDYDYFHAASKENAETC
DSQNEDSPLKGYGFIKFSKHEMALKAIETLNNLNWLNHCLVVNKAVQNRSLYHNHGNYRP
PSNRASVSSRQSSLSSVPLFGATAAGAAIHAPPPGFPIFATAFSLSPTASEGLLTDRSPV
RSGSSNDGSPRVDSTPHVQIFTSQPPALSYSPESLTAPGSRQGSLYMPSCAPMYSPAGPV
ASTHPQFAHHSGAHAAAAAAAAAAAFGGLPIPTRDQQESNLYIKHIPLSWRDRDLNEFYS
QYGEIISAKIITVGGSKNGSGDKESLDDVPIGTSRGYGFVCFKNPLDASRAMMATDRFQV
DRNHVLYVSFAQKRGKSVSSNSPSSNGGGSHQQPPSSGRSLSHTSYHQNHSNSRQSAFDS
FMGNYNPKFLNAMLQQQSHVNGSSGTPTPNTLNQRGSWGGPAQKPSYMVPLVLPPPPLSV
PRSGMAGPTIKKVHESFEAATAAGSTVIEIE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttgaagcaatgggtattaaaaaggcggaggatatcaaactagctgaagaacta
gatatgtttatggttctagaggagggagaaaaccaggagcagctgagggggagtgggatg
gaggtgttggatgggggcgctattgaggttaaagagaaggacttgaacaatggaggtggg
agcaagaggaagaggggtgggagggtagtagatggaggtgttactgatgggagtagttca
gggttaggaggaggctgtggtggtgtgttaggaaggcatcaagaggaagaattttgtggg
cctaagagtaacactcctaattcgcagctggagcagttagagaatacgaatcttcttacc
gtgcggattaaatgggttaacccggagaatcttatggatgaccataagtcgcaactcttg
aataagcataatgatgcaattctctacaatagaggtcttcctattaatccttctattatt
gaaaattatgaatacttttcggataagaagaggttagatatattaaaagagaatgaggat
acctatacttttgaagctgggactcaggagtatgcaaagtcttatgctaaggattctaat
acatggttgtatgatctagtggtccaagcacagttcaagacgtttcaggatttagttaat
acaagaaatactgttaaggaacttcttgagtctaacaagcatgtaaaagcttggtccatt
agtcagaatccacatgctctcactcacccaggaaatctttatattcgaggtattccaaag
gacttgaccgttgatgatgtgttgcctttgttttcaaagtttgggacggtattgtcgctc
aaaattattgttgatataggtaccggagaatctctgggatacggatttatctcctatcca
ttgggttctcaagcagctagatgcatcaaagaactgaatgggaatttaatgaatggttct
cttttgttcatcaactatcatgttgaaagaaaggaaagagagcgtattcaccttgatcat
ctgaaagaagacaatgatgacgaaagattcaggggtgttttcgtaggtaatttaccaaca
gaatatgaagatggtacattaactacacctgaacaagtatttaaaaaattcaaagagctg
ctggacccggtggaaatactttcatactactttccgaaacggaattcgaatactaatatt
gaatataaggatgattacgattacttccatgcagcatctaaggaaaatgcggaaacctgc
gactctcaaaatgaagattcacccttaaagggatatggtttcatcaaattttcaaagcat
gaaatggctttaaaagcaattgaaactttgaacaatctaaactggttaaaccactgtttg
gtagttaacaaagcagttcaaaataggtccctctatcataaccacggcaattatcgtcct
ccaagcaaccgtgcatccgtttcatcgaggcagtccagtttgtctagtgtaccactattt
ggggcgactgctgctggcgctgctatccacgctcccccacccggatttccaatatttgcg
accgctttctcactttcacctacagcttcagaaggtttgttgacagacaggtcacccgtg
agatccggctccagtaatgatgggtcacccagagtggattctacaccccatgttcagata
tttacgagccaacctcctgctttaagttactcaccagaatcgttaactgctccgggctcg
cgtcaaggttcattatacatgccttcgtgtgctccaatgtattcgcctgcaggccctgtt
gctagtacccatcctcagttcgcccatcattctggggcacacgcagctgctgcggcagcg
gcagctgctgctgcgttcggaggattgccgatcccaacaagagaccagcaggaatcaaat
ctttatatcaagcacattcctttatcctggagggatagagatttgaatgagttctactcc
caatacggggaaattattagtgcgaagatcatcaccgttggtggatccaaaaatggctcc
ggtgataaagaatcactagacgatgtgccgataggaacttctaggggatatggtttcgtg
tgctttaaaaatccgcttgatgcttctcgtgctatgatggctacagatagatttcaagtt
gatagaaaccatgtgttatacgtttcttttgcacaaaagagaggcaagtctgttagttct
aactcaccttcttccaatggtggtggatctcatcagcagccgccttcgtccggacggagc
ctctcacatacttcttaccatcaaaaccatagcaactcaaggcagtctgcttttgactcg
ttcatgggaaattataatccgaagtttttgaatgcaatgctgcaacagcaaagtcatgta
aatggctcttcaggcacccctacacctaacacacttaatcaaagaggctcttggggtggg
ccagctcagaaaccatcctatatggtccctctggtgcttccaccgcctccactcagcgtt
ccgagatccggcatggctggaccaaccattaagaaagtccatgaaagcttcgaagccgct
acagcggcaggttcaaccgtaattgaaatcgagtga
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