Eremothecium cymbalariae: Ecym_6073
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Entry
Ecym_6073 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
erc
Eremothecium cymbalariae
Pathway
erc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Ecym_6073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_6073
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Ecym_6073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
11468820
NCBI-ProteinID:
XP_003647288
UniProt:
G8JUZ2
LinkDB
All DBs
Position
6:complement(135051..138947)
Genome browser
AA seq
1298 aa
AA seq
DB search
MDTRHRYNIPQAKRSWRDTLNQNEKLYRKSSGFDPDPSFTSHLPHKNFKPETSDKKLEPQ
LSDKTYYLPENQTESTVSFQEQPLISPEVLDVPSQRALTFLIFIIIQSYKLYDLVLLKSG
LPVSGFLLTNSKFNFISKYAIIDSLFLYFLPSFKIPKLCFKPFIIFAQILVMIALTVLLS
NDKNFPFMSLLISTWSKYNKKELSLTGTSVSHGKIMDRSSHFKGAHTIKILPENTVMFNP
FQESYCLPMDEAITDLKVPIRINSTSEINFLQLEYRDLYSNDVELLNLTKKDLVKMKVKN
ELDPNILYLQVPLQKIGFYTLKKIVDINNIGLKIYKPQLIVPHCPIATISGVGPEDKCLG
DKYTVTIQVTGVPPMKLKYTKTTNNDKFNFIDSSLQPEYFESPLLSNRKSFSNKDIEDLK
WARIYPVDINLESFVNNDGVYSYSIDQVVDGLGNAMDFKGLSSEVRNKYDLEYKFNVHDL
PRASLDEKVNPNSGTKRSLVLSVESTNFAHGAPYVANITYSYGNERSTFQHEFSKPGAEL
AVDKPGTYTLTSIQSKFCTGAIVSKSTVLITKPIPPQLSVKATPILDQCIGQVGLNFDLT
FTGVPPFYYTAKIFKVEKGERRLHERKQFTSQGARNQYSYNPSSEGHYEIVFDEISNVLF
KEPLPLLPSSDYTFDTSMRVKANALIAATHDSKLCLGDSSKIPLKFTGEPPFYLNYDIVE
TSSNKRTSYHLDNILSYQYEIVTPEFKVGGDYILSLISVKDSSKCLVPLSGNDARLRVRR
DVPTAGFSLLDSTANELKIKAGASASLPLRLSGEPPFTVKYQHLNKHGDIAGVYETKFQS
NHRPALKVTDEGSFKLISMRDQGCEGNIESNSVHKVSFFEKPKFSVVKHKKISKLNPLNF
VKEPVCQGFEETVDLSLAGSAPFTVLYELTSPNGQISSKSIQVATKYASLKLPNEQPGEY
ILTIKAVYDSYYTPKDLSSQNIKTSDVTIRQTVNRLPNVRFADRGKTYRTCLANLDQPAL
LDPIPLHFSGGKGPYSVSFSIYHESTSKSDYFTMDNVTSDSFNYKLLYQGLKLGNHIVSI
EKVVDWNDCTHDIVAENNHILISVTDVPKIVLMEPTMEYCVGDYVSYQLHGAAPFIIKYE
FNGIQLKSKEQSTQFVRFASEPGTISINSIQDSSSQCVVNFNKAGKKSEFDRLSLVIHPI
PSVIISKGDNVIEDIHEGDQAEVLFSFEGTPPFSLTYVRTEEVDGKKGRRPQIVETHKVS
DIYSYEYKVTTSLQGTYEAIEVSDAFCSAKNDAFFNNY
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggacacgagacataggtacaatataccacaggcgaagcgttcctggagggatactctg
aatcaaaatgaaaagttatacaggaaatcgtcaggctttgatccagatccatcgttcacg
tcgcatttgccacacaaaaatttcaaacctgaaacgtcagacaagaagttggaaccacag
ctatcagataaaacgtattatttgccagaaaaccagacagaatcgactgtttcgtttcaa
gagcaaccgcttataagtcccgaggtgcttgatgtgcctagtcagcgtgcgcttactttt
ttgatatttataatcattcaatcgtacaaactgtatgacctggttttgttgaaatctggg
ttgcctgtgtccggcttcttattgacaaattcaaaattcaattttatatcgaaatatgcc
attattgactcattgtttctgtactttttgcccagcttcaaaattcccaagttgtgtttt
aaaccgtttattatctttgcgcagatactggttatgatagcattgaccgttttattatct
aatgataaaaatttcccatttatgtcattgctaatttctacctggagcaaatataacaaa
aaggagctaagtttgacgggaacatctgtaagccatgggaaaattatggatagatcttcg
cactttaaaggtgcacataccatcaaaattttaccggaaaacacggttatgttcaatcca
tttcaggagtcctattgtttacccatggatgaagcgatcactgacttgaaagtgccaatt
cggattaattctacttcggaaattaattttttacaattagaatatcgtgatctttattct
aatgatgtggaattgctcaatttgactaagaaagatttggtaaagatgaaagtcaaaaat
gaacttgatcccaatatactttacttacaagttcctttgcaaaaaattggtttctacact
ttgaaaaagattgttgatattaataacattggactcaaaatctacaagcctcaattgatt
gtcccacattgtccaatagctacaattagtggagttggcccggaagataaatgtctaggg
gataaatataccgtcaccatccaagttactggtgtcccaccaatgaaattaaagtatacg
aaaacaactaacaacgataaatttaactttatagattcttccctgcaaccagaatatttc
gaatcgcccttgttgtccaatagaaagtccttctccaataaagacattgaagatttgaaa
tgggctagaatatacccagtggatattaaccttgaatcatttgtcaacaatgatggtgta
tacagttattcaattgatcaggtagttgatggtttaggcaatgctatggatttcaaaggt
ttgtcatctgaagtgcgcaacaaatacgacttagaatacaaatttaatgttcacgatttg
cctcgtgcttccttagacgagaaagtcaatcctaactcaggaactaaaaggtctttggtc
ttgtcagtagaatccactaattttgcccatggtgctccttatgttgcaaacattacatac
tcatatggaaatgaacgttcaacgtttcaacatgagttttctaaacccggtgctgaactt
gcagttgataaaccaggcacatataccctaacatccattcagtctaagttttgcacaggc
gctatagtgagtaaatcaactgttttgatcaccaaaccaatcccacctcagctgagtgtg
aaagcaacccctatattagaccaatgtataggccaggttggtctgaattttgatctgact
tttacaggtgttcctccattctattacacagcgaagattttcaaagtggaaaaaggtgaa
cgtagattacatgaaagaaagcagtttacttctcaaggtgctagaaatcaatatagttat
aatccatctagtgagggacattacgagattgttttcgatgaaatttccaacgttctattt
aaggaaccacttccgctgcttccatcatcagattatacatttgatacttctatgagggtt
aaagcaaatgctttaattgctgctacgcatgactccaaattgtgcttgggtgatagtagc
aagattccattaaagtttacaggcgaaccacctttttacctaaattatgatatcgtggaa
acatcttctaacaagaggacgtcataccatctggataacattttatcttaccaatatgag
attgtcactcctgagtttaaagtaggaggtgactacatactgtctttaatttcagttaaa
gattcttcgaagtgtttagttccgctaagtggaaatgatgctagacttcgcgttaggaga
gacgtaccaactgcaggtttcagtttattggattctactgccaatgaattgaaaatcaaa
gcaggagcatctgcttcgcttccattaaggttgtctggagagcccccatttactgttaaa
tatcagcatttaaacaaacacggtgatattgctggggtttacgaaactaagttccaatct
aatcacagaccagccctaaaagtcacagatgagggttcctttaaattgatatcgatgaga
gatcaaggctgtgaaggtaatatcgagtctaatagcgtacacaaggtcagtttctttgaa
aaaccgaaattctctgttgtcaagcacaaaaaaatcagtaaattaaatcctctaaatttt
gtcaaagaaccagtttgccaaggcttcgaagaaactgtagatctatcattggccggatcc
gctccattcacagtgttgtatgaattgacatcacccaacggccaaatctcctctaaatca
atacaagtcgccacaaagtacgcatccttaaaacttccaaatgagcaacctggtgaatac
attttaaccatcaaggcagtatacgactcctactacactccaaaagatttgagtagtcaa
aacattaaaacctcggacgtcaccatcagacaaacagttaatcgtttaccaaacgttagg
tttgctgacagaggtaaaacttacagaacatgtttggctaacttagatcagcctgcactt
ttagatccaattcctttgcatttcagtggaggcaaaggaccatattccgtttctttcagc
atttaccatgagagcacttcaaaaagtgactattttacaatggataacgttacttctgat
tcgtttaattacaaactattataccaaggtttgaagttaggtaatcatattgttagtatc
gagaaggtagtagattggaatgactgtacgcacgatattgttgccgaaaataatcacata
ctgatctctgttacagatgttccaaaaattgttctaatggaaccaactatggaatattgt
gttggtgactatgtctcatatcaactccatggggccgctccattcataataaaatacgaa
tttaacggaatacaattaaagtccaaagagcaatcaacacaattcgtgagatttgcaagt
gaaccaggtactatctctattaactctatacaagattcttcttcgcagtgtgttgtgaac
ttcaacaaagcaggtaagaaatctgaattcgacagactatcgcttgtaatacatccaatt
ccatctgttatcatctcgaaaggagacaatgtgatagaggacatacatgaaggcgatcaa
gctgaagtgttgttctcgtttgaaggcacacctccattttctttgacttatgttcgtacg
gaggaagttgatggcaagaaaggcagaagaccccaaatagttgaaactcataaggtatca
gatatatattcctatgagtacaaggtcactacgagtttacaaggtacatatgaggccatt
gaagtttctgatgccttctgttctgccaagaatgacgccttttttaataattactaa
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