Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12882 | nuclear cap-binding protein subunit 1 |
|
Organism |
erc Eremothecium cymbalariae
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:erc00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_6080
09122 Translation
03013 Nucleocytoplasmic transport
Ecym_6080
03015 mRNA surveillance pathway
Ecym_6080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:erc03019]
Ecym_6080
03041 Spliceosome [BR:erc03041]
Ecym_6080
Messenger RNA biogenesis [BR:erc03019]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
Ecym_6080
Spliceosome [BR:erc03041]
Common components
Common spliceosomal components
Cap binding complex
Ecym_6080
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:complement(153290..155863)
|
AA seq |
857 aa
MILSKDYEEEDGYRDFRPRYPKRQRLPPVVQLCKDMLPDIRTIGESVKAFEEDIKFLSEA
IINEFGNDEYFNSALLSTFNALILEQPHKQPAIALLTMVVNSGNEVAGKTIVNQFYEKLQ
KWISASADDDFEVTSNETGPWNKVKLTLRFLSLLSPIISVEEIIGVYRKLFELAVELNKA
SGEKRNPLSEAIYTNTLLDIPYLFFFNRESEELKLKVQDLMLYVESNYFVKKVDLSLTRE
YNKNLPYAPVQWVQVVLTNVKNCLANDMKELKNLFPDYQHMLGSLPAELQFNDPLVLPEL
EKLLPFSGLDKGLGSVDSMWKTPRTAFQVYLPNVVGAFSTVVPVTSYAGMLFDDIIVDIV
ESLEFNRHEVARQVVTLDLYFKPGIFTEPGLSVAQLLAQHEETPELSTYKIEDLAIENIL
GLIFKLPTVTQSFAYFYTLLVEICQNSPKAIAPVFGRAFRLFYNNLDNMDHELKMRYLDW
FSIQMSNFNFSWKWNEWEQDSIAFSKSFYNPRITFAKNLIRKELRLTSNRPDVEDSLTVE
FKQYLDASYITKNQLTAYYQSLFEGFEFDPEIIKDNDLLFKNEAFPFHDKVQLILDYFHK
QQLEKNVSELESLLEDIRTTCSAQIPDFDRFTVTLLIQALVYSGNRSLSHANKYISDAKN
DLVMILGKIALSDVVKEQWIIEAVIRYWNCNSQNGFLIVDSFKHSELVTAKSILAFSFSD
LNGQNLGLVEATSIESTFRTLTQLALQQTSDISVFEFVFERLVTIANETISQLGMPDEEI
VAPLVDNESMLDDDELSRLDLMWKYESTMGFIKSILRKYSDEYSILLDKFKSDVDQSVSH
EPTRAQLNQWFQEICEL |
NT seq |
2574 nt +upstreamnt +downstreamnt
atgattttatctaaagattatgaagaagaagatggctaccgtgacttcaggccacgctat
ccaaaaagacagagactgccaccagtggttcagctttgtaaagatatgttgccagatatc
aggactataggtgagtcggtgaaggctttcgaagaagacattaagtttttaagtgaagcg
atcatcaatgaatttggtaatgatgagtacttcaattctgcgctgttgtcgacctttaat
gcactgattctagaacagccacataagcaaccggcaattgctttgttaaccatggttgtt
aactctgggaatgaagttgctgggaaaactattgtgaatcagttttacgaaaagttacaa
aaatggatcagtgctagtgcagatgatgattttgaggtgacgtctaatgaaactgggcca
tggaataaagttaaactaactttgagattcttatctttgttatctccgataatttctgtg
gaggagataattggcgtataccggaagttgtttgaattggctgtggaattaaacaaagcc
agtggagagaagagaaacccattatctgaagctatctatacaaacactttattggatatc
ccatatttattcttttttaacagagaaagcgaagaattgaaattaaaggtccaagatcta
atgttgtatgtggaatctaactattttgtgaaaaaggttgacctttcattgactagagaa
tacaataaaaatttgccatacgcacctgttcagtgggtccaagttgttttgacaaatgtt
aagaattgcttggctaatgatatgaaggaattgaagaacttattccctgattatcaacat
atgttgggctctctgccagctgaactacagtttaacgatccattagtattgcctgaatta
gagaaactattgcctttcagtgggttggataaagggttaggttccgttgatagtatgtgg
aagactccaagaaccgctttccaagtctacttgccaaatgtcgtgggtgctttctctact
gtcgttccggtcacctcgtatgccggtatgttattcgacgatataattgttgatattgtt
gaaagtttagaattcaacagacatgaagttgcaaggcaagtggtaacattggacctatac
tttaagccaggcattttcactgaaccaggtctgtcagttgcacaattattggcccaacat
gaggaaaccccagagctctctacttataaaatcgaagatctagctattgaaaatattttg
ggtttaattttcaagttaccaacagtcactcaatcatttgcctatttttacacattgttg
gtcgagatttgtcaaaattctcccaaagctattgctccggtttttggtagagcgttcaga
ttattttacaataatttggataatatggaccatgaattaaaaatgaggtatctagactgg
ttttcgattcaaatgagtaactttaatttctcttggaaatggaatgaatgggagcaagat
tccattgccttctccaagtcgttttacaatccacgtattacgtttgccaaaaacttaata
agaaaggaattaaggttaacgtcgaataggccagatgttgaagatagtttaacagttgaa
ttcaaacagtatttggatgcctcatatataacaaagaatcaactaactgcttactatcaa
tctctttttgaaggatttgagtttgaccccgaaatcatcaaggataatgatttattattt
aaaaatgaagcattcccattccatgacaaagtccaactgattttagattattttcacaaa
caacaacttgaaaaaaatgtttctgaattggaatcgttgttggaagatattaggacaact
tgtagtgctcaaattccggatttcgatagatttacagtcacattgttaattcaagcgttg
gtatattcaggtaatagatctctatctcatgccaacaaatatatctccgatgccaagaat
gatttagtaatgatattaggcaagattgccctgtcagatgtagtgaaagaacaatggatt
attgaagccgttattagatattggaactgtaactcccaaaacggatttttgattgtcgat
tcgttcaaacacagcgaattggtaactgccaaatctatcctagcgttctctttttcagat
ctaaatggccaaaacttggggttggtcgaagcaacctccatcgaatctacttttaggaca
ttaacccagctagctttacaacaaaccagtgatatcagtgttttcgaatttgtatttgag
aggttagtgactattgctaacgaaactatatcacaattaggtatgccagacgaagaaatt
gtagccccgctcgtggacaacgaatctatgcttgatgatgatgaattgtcaaggctggat
ctaatgtggaaatatgaaagcacaatgggtttcatcaaaagtattctacggaagtattcg
gatgaatattccattttgttagacaagttcaaatcagacgtcgatcaatctgtttcccac
gaaccaacacgggctcaattgaaccaatggtttcaagaaatttgcgaattatga |