Eremothecium cymbalariae: Ecym_6343
Help
Entry
Ecym_6343 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03420
Nucleotide excision repair
erc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ecym_6343
03430 Mismatch repair
Ecym_6343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_6343
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ecym_6343
DNA repair and recombination proteins [BR:
erc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ecym_6343
MMR (mismatch excision repair)
Other MMR factors
Ecym_6343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Arif-1
AAA_11
Motif
Other DBs
NCBI-GeneID:
11471107
NCBI-ProteinID:
XP_003647536
UniProt:
G8JUD9
LinkDB
All DBs
Position
6:complement(660862..664419)
Genome browser
AA seq
1185 aa
AA seq
DB search
MLLKPNIQWPLHCKHKAAFLNYQRVQKTPFARETTTNRVLLSNRVRDGASWLQLEDLPIS
YIMEFDLFNGLNPRQYEAVTFDPTKALQIVAGPGTGKTKVLTTRYVYLIAFKNINPLSII
MTTFTKKAADEIKARVEPILRKCGYDTNKLLIGTFHSICNNLLHQYGHLIDLPNHWRVFA
SSEVDPIVKKLVEECPDQIRDYALSYRANKVNLCLPNRKSEWALAEKQIIKNISRLKAEA
LSPEAYKNLDSHDEALYYFYNAYQVEMLRQGGLDYDDLLFYSYKLLSKNRCWNHIKHVMV
DEFQDTNNIQLELMYLLSRGKHQSCEGVTAVGDPDQSIYAFRSALARNFDEMIQKCPIEY
GQVVLEENYRSTQNILDTSEYVIKQQSDGRNQRLPLRAQFSYDIKPVYMKFPDGFLEGPT
ICKEILYLKAIPDLFSFNDIAILVRQRRQIKAIERALIDHRIPYKIIKSVSFWERRETKA
MLDLLKVVCSDLDRYAIIRSLQYPSKGLGDVSIAKIEKLFDEELDKPAFVVLKELADGLK
DHKFPAKGKVSIKNFVSLIETARKLCDENPKMSTRDELFEYLYDASGMKNEFLFEDDKAD
RKAKALEECEPNKYNKRHKNIELVKSHFLGFHPDEMDPKYRIEMNPDTNQPCIVNDAPVI
KQDGEGLENLSKYFNSKLKPLTGKFDTSCGERVANNDAKQENENPRIDIYKFLRQFIEFI
NLYTTNEALDPSCLTEDQVAAKKQRDKNGILTVTTIHGSKGLEWPIVFVPGCVEGIIPCV
YANSRDDDSEEENDVEDAKDTEDLQNSNDNSPKKGKQSKASESIDEERRMFFVALTRAKF
LLYVSAIENNERVPIIPSQFLTPEVMRTLTGSQQLFDKVDYIDSLYEAMHKEPKRTPSFC
LERLLEDYHNFVAANREFLIWKKEKILHVNTIDFGENIQTERFNMGITTASKQLKRSEKM
LFGQDLNPCSRQSANYAPTISRKPSNTITRKQFAPPPTLSQRAPNTTGKTFAPKPNEHLK
PPTENPKESVRRHKYVKIRSNTLEDVVIASECPQITGVKERVRSGMLSPSKSQHRIVAEE
IRLEDLSDEDQCGEVNIKRDEVTAAELLHNPNDLEVDNRPILTNAKVLADASRIEISKKL
NGGTKRNRNRKKIKKESENDNDILMRLKRARKATPTISDEVIVLD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaaagcccaatattcaatggccacttcattgcaaacacaaggcagctttttta
aattatcaacgcgtgcagaagacgccttttgcaagagaaaccacaacaaacagagttctg
ttaagtaatagggtaagagacggagcaagctggttgcagctggaagatctacctatctca
tatattatggagtttgatctatttaatggattgaacccacggcagtatgaggctgttact
ttcgatcctacaaaggcattacagattgttgctggtccaggcaccggtaaaacaaaggtg
ctaacaactaggtatgtctacctaattgcatttaaaaacatcaaccccctttcaattatt
atgacaacatttacgaagaaagctgcggatgaaattaaggctagagtggaacctattctt
cgaaagtgcggctatgataccaacaaattgttaattggtacttttcactcaatttgcaac
aatcttttacatcaatatggccatttaatcgatttacctaatcattggagggtatttgcg
agctcagaagtcgatcctattgttaaaaagttggttgaagagtgcccagatcagatccgt
gattatgctctttcttatcgtgcaaacaaggtcaacttatgcctgccgaatcgcaaatct
gaatgggcattagctgagaaacagattattaaaaatatctcccgcctaaaagcagaagct
ttaagcccagaagcatacaagaaccttgattcacacgatgaagctctttattatttttac
aatgcttatcaggtagagatgttaagacagggggggcttgactatgatgatctgttattt
tactcatataaacttctatcgaagaacagatgctggaaccatattaagcatgtaatggtt
gatgaattccaagacaccaacaacattcagttagaactaatgtatctattatcaagagga
aaacatcaatcttgcgaaggagtcactgcggttggagatccagaccaaagtatctatgca
tttcgttcagcattggcccgaaattttgatgagatgatccaaaaatgtcctattgaatat
ggtcaagttgttttggaagaaaactatagatcgactcaaaatatccttgatacttcagaa
tatgtcataaagcaacagtcagatggaagaaatcaaagactgccactacgtgcacagttt
tcatatgatatcaaaccggtttatatgaagtttcctgatgggtttttagaagggcctaca
atttgtaaagagatcctatatttgaaggccatcccagatttgttttccttcaacgatatt
gcaatcttagttcgacagaggagacaaataaaagcaattgaacgggcattaattgaccat
agaatcccatacaaaattatcaagtccgtttcattttgggaacgaagagagacaaaagca
atgctggacttgcttaaagtggtatgctcagatttagacagatatgcaattatcagatct
ttacagtacccctctaaaggcctcggtgatgtaagtattgcaaaaattgaaaagttattt
gatgaagagttagataagcccgcatttgtagtcttgaaagaacttgcggatggcctgaaa
gatcataaattccccgctaaaggtaaagtttcaataaagaattttgtttctctcattgaa
accgctaggaagttatgtgatgaaaacccaaaaatgtctactagggatgagttatttgag
tatttgtatgatgcatcaggcatgaagaatgagtttctttttgaggacgataaggctgat
agaaaagccaaagctcttgaagaatgtgagcctaacaaatacaataaacgccacaagaat
atcgaacttgttaaatctcactttttggggtttcacccagacgaaatggatccgaagtat
aggattgagatgaatccggatacaaatcaaccgtgtatcgtaaacgatgcacctgttata
aaacaagatggagaaggattggagaatttaagcaaatactttaattctaagcttaaacca
ttaacagggaaatttgatacaagctgtggagaaagggtggcaaataatgatgcaaaacag
gaaaatgagaacccaagaatagatatctacaaatttctacgtcaatttattgagttcata
aacttgtacactacaaacgaagctttagacccatcttgcttaactgaagatcaggttgct
gctaagaaacaaagagataaaaatggaatacttactgtcacaaccattcatggctctaaa
ggtcttgagtggccaattgtttttgtaccaggttgtgttgaaggtataattccctgtgtt
tatgcaaattcaagagatgatgactctgaagaggaaaatgacgtcgaggatgctaaggat
acagaagatcttcaaaattcgaatgataatagccccaaaaaagggaagcagtcgaaagct
tcagaaagtattgatgaggagcgtcgtatgttttttgtagcactaactagagcaaaattc
ctactttatgttagcgctatagagaataacgagcgagttccaattattcctagccaattt
ttaacacctgaagttatgcgaacgttgactggatcacaacagttatttgataaagtggat
tatattgattctttgtatgaagcgatgcataaagaaccaaaaaggactccaagtttttgt
ctcgaaaggttgctggaagattatcataactttgtagctgctaatcgtgagttcttgata
tggaaaaaggagaagatattacatgtaaatactattgacttcggtgaaaatattcaaacc
gaacgttttaacatgggaatcaccactgcatcaaaacaattaaaaagaagtgaaaaaatg
ctatttggtcaagacttgaatccatgttcacgacaatctgcaaattatgctcccacaata
tctaggaaacccagtaatacaattaccaggaagcaatttgctccacctccaaccttatct
caaagggccccaaacaccactggaaaaacgtttgcaccaaagcctaatgaacatctgaag
ccgccaactgaaaatcctaaggaatctgtaagacgtcataaatacgttaaaattaggagt
aatacactcgaagatgtcgttattgcaagtgaatgcccgcaaataacaggcgttaaagaa
agggtacgctctgggatgttatccccttctaagtcgcagcatcgaattgtagcagaagaa
ataagattagaagatctgtctgatgaggatcagtgcggtgaggtgaacatcaagagagat
gaagtcaccgctgctgagctactacacaatccaaatgatttagaagtagacaacaggcct
atcttgacaaatgccaaagttttagcagatgctagtagaattgaaatttccaaaaaatta
aatggcggtacaaaacggaatagaaataggaaaaagattaaaaaagagtctgagaacgat
aatgatatattgatgagacttaaaagggcccggaaggcaacgcctacaattagcgatgag
gtaattgttttagattag
DBGET
integrated database retrieval system
