KEGG   Eremothecium cymbalariae: Ecym_6378
Entry
Ecym_6378         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K12879  THO complex subunit 2
Organism
erc  Eremothecium cymbalariae
Pathway
erc03013  Nucleocytoplasmic transport
erc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Ecym_6378
  09122 Translation
   03013 Nucleocytoplasmic transport
    Ecym_6378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_6378
   03041 Spliceosome [BR:erc03041]
    Ecym_6378
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Ecym_6378
Spliceosome [BR:erc03041]
 Complex C
  Other components
   EJC/TREX
    Ecym_6378
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Ecym_6378
SSDB
Motif
Pfam: THOC2_N Tho2 Thoc2
Other DBs
NCBI-GeneID: 11469140
NCBI-ProteinID: XP_003647570
UniProt: G8JUH3
LinkDB
Position
6:738540..743309
AA seq 1589 aa
MSIIGKLNSLAKEHTPFKRTIFTDEFLKDWQGNSSKLLERYDSIEESSEKDNLIYDIFNE
AMVFTNKEFKDLLNDDYGMLGEFLSKLCEKNSQANPRMLANIINYFPRSLEDDSNVIALI
GAIRGVDFEFSASLVEKLLTHRWTKEQTSLYKRNLISEKYHLKKYNLLFECAPGFSQICS
LLHVAYSDKDRFQSLKYYWNQMQFIAGKYTLDPIRVLDVVLRISSIYIHNHYDFLLDLLK
VSDYWPHEISDPFDWNKLNYGGNVVASRLIAYKLSNEKFDHKYMDMVCILIKEGFISYIS
IFEALRPDEETVQTYVEEYYADLEKQSSEGVLNPLAMAAALPDEDETSAPAANGEQKSDG
QVNVKKEKERQEQREEKERKNRHYRVKRTGKWRLVTSCLNHGLLFPALYSIKKNEKVALS
IDALVEACIRIFDYMIQPLYEQAINAPKCNAVSRVTMKMSNSGLPSKEPRLIHEYVSPNV
SERFLFNVKYSFYYTEWTDKLPVLHNIEDLFRYSHQILGLLGPRLSVSSSVITKLNSIAV
HDIESSNNSEDTIEMWINYFRKFIFPAIAAIEDDFVPNLSAYELMKRFPFEKRYFLYNEM
YTKTSNDNVFVRLAFNKVGKRIKTLLKSLSIDDIADKVNDVSRIVSSNPLAALGPIVNQI
ENYDKVSELVVISANKFPKIAYDILQYVLLLKLTSGRNLLQSDGINQNTWIQRLSVFIAG
LAKSCPEMDLTNILTFLVKSLHKNRNVSFPVLKELISKVGGIQNLNHVSSQQLQMLNSGP
SLQKVARSLILDTRQDTFEAARAITQVFVKLNAITELIVMLCNLNISNQSDDIHYKILST
KCDDSNSLLWTLIEMLKHTLSLEEFVSNVLPFYELVNDYNVPIEWSFHIWRDFFDEKIHE
GDESMKQIDEIIEKTEFKYVSFENLNKELFTNFWKLSLYDVQFNKALYDKTTSALNSKLN
AVKLQRERNSIMNDVQEVMSNCLAHQRAFKQIQELLQGNKEKWLPELNAETNQAFFQFCI
LPRTLFSSADAIYSALFIVELCGIQNSFSIFKFFVDSHILGGLLFSCTVTESANMGFFTN
VLLNTFEKARSEGVFDNCSLEEIYRLHSIMIGDLTGLLAESNYMSIRNSIEFLNQISHKF
PVVDEHIKELCHSLEYKLVGDNREDIRLPCNALIGHLKSRLKNASRKQDFYELPEEELLE
IRKLDEERMLIKKYQESLAQEDEAKKLEEESKMNILKPLDDRVESRYMANTGEADSTDAE
KTKQQSEAVSCQLHQILDNMDQVLNLLRTESAEEAPRFIRVVFFKNEFKKVINDYKGDLE
GFRKNIANILVDYFYSMVQWPQSNPTFVQKARDIKTACLKCNAPISKATKIKVMADDLYG
EDIASSWATNPKAARTNRESRFAGAKPVPNLTSDTSTSNENKWKTERVEKTAIDTRNTSR
YADEDTKSSTQTKKDDKPSGSRFNNGKVPVKKPVDNKQDQKPSNSLRNRVGSRFEGRQEN
STRFSGPRADPIRFPTAPARHAEPVNESRFRNMPKELSRKRAAEDYRYGDSKRQRQEDDN
RRKPTKETRGEQHPTAILSQKKGGFSRFR
NT seq 4770 nt   +upstreamnt  +downstreamnt
atgtcaatcattggaaagttaaatagtttagctaaagagcatactccttttaaaagaact
atattcacggatgagttcttgaaagattggcaaggcaattctagcaagcttctggagcga
tatgattcgatagaggagagttcggagaaagataatctcatctatgacatattcaatgag
gctatggtattcactaataaggaattcaaggatctacttaatgatgattatgggatgtta
ggagaatttttgtctaagttatgtgagaagaatagtcaggctaatccgcgtatgctggcc
aatatcataaattacttccctaggtctctagaagatgatagcaatgtcattgcgcttatt
ggagcgatacgtggcgttgattttgagttttctgctagtttagtagagaaactattaacc
cacagatggacaaaagaacaaacatcgttgtacaaacgaaatctcatatcagaaaaatac
cacttaaaaaagtataatctgttatttgaatgcgccccaggcttttctcagatatgttcg
ttgttacatgtggcatactctgataaagataggtttcaatctctgaaatattactggaat
cagatgcaatttattgcaggaaaatataccttggacccaattcgtgttttagatgtggtc
ctcagaatttcatccatatatatccataatcactatgattttctgctggacttattgaaa
gtttccgattattggcctcatgaaatctcagatccgtttgactggaataaattgaattat
ggtggcaatgtagttgcttcacggctgatcgcctacaaattatctaacgaaaaatttgat
cataagtatatggacatggtctgcatattgataaaagaaggtttcatctcgtatatttct
atctttgaggctttgaggcctgatgaagagacagtgcaaacttatgttgaagagtattat
gccgatttagaaaagcagtcttcagaaggagttttaaatcccttagctatggctgcggca
ttaccggatgaagatgaaacctctgcacctgcagctaatggggaacagaagagcgatggc
caagttaatgtaaagaaagagaaggaaaggcaggaacagagagaggaaaaggaaaggaag
aatagacactatagggtgaagcggactgggaagtggagattagtaacaagttgcctaaat
catggactattattccctgcattgtattccataaaaaaaaatgaaaaggtcgcattatct
attgacgccctggtagaggcgtgtattagaatatttgattacatgatacaaccattatat
gaacaggcaattaatgcaccaaaatgtaacgctgtttctagagtcaccatgaaaatgtcg
aatagtggtttaccatctaaagagccgcgtttaattcatgaatatgtatctccaaatgtg
agtgagcggttcctgtttaatgtgaagtattcattttattatactgagtggaccgataag
ttacctgttcttcacaatattgaagacttatttcgttattctcatcagatacttggtctt
cttggtccaagactgtcggtgtcttcatctgtaattaccaaactcaattctattgcagtt
catgatattgaatcttcaaataactccgaagatacaatagagatgtggattaactatttt
agaaaatttatatttcctgcaattgctgctatagaagacgacttcgtgccaaatttatcc
gcctatgaattaatgaaaagattcccatttgaaaaacggtactttttgtataatgaaatg
tacactaagacatcaaacgataacgtctttgttagattggcctttaataaagtggggaaa
aggataaaaactttattaaaatccttaagtattgatgacatcgctgataaggtaaatgat
gtttcgagaattgtatccagtaatccgctagcggcattgggacccattgttaatcaaatt
gagaattatgataaggtttcagaacttgttgtgatttcagcaaataagtttcctaaaatt
gcttacgatatcttacaatatgttctattgttgaaattgacttcaggcagaaatttatta
cagagtgacggtataaatcaaaacacttggatccaacggctaagtgtattcatcgctgga
ttggcaaagtcttgccctgaaatggatttaacgaatatattgactttcttagtgaagagt
ttgcataagaatcgcaatgtatcctttccggttcttaaggaactaatatctaaggttggc
gggattcaaaatttgaatcacgtaagttctcaacaactccagatgctaaattctgggcct
tcgctgcaaaaagttgccagatctttgatattagacacaagacaagatacatttgaagct
gcacgagcaatcacacaagtctttgtgaaattaaatgctattactgagttaatcgtaatg
ctttgcaacctgaatatttcaaatcaatctgatgatatacattataaaatattgtctact
aaatgtgacgattctaattctttgttgtggacactaattgaaatgttaaaacatacacta
tcattggaggaatttgtttccaatgttttgccattttatgaactggtaaatgactataat
gtaccaattgaatggagctttcatatatggagagatttttttgatgagaaaatccacgaa
ggtgatgaatctatgaaacaaattgatgaaattattgaaaaaactgaatttaaatatgtg
tcatttgagaatttaaacaaggaattatttactaatttctggaaattgtcgctttatgat
gtgcagtttaacaaagcgttatatgataaaactacaagcgctttaaactcaaagttaaat
gcggtaaaattacagcgtgagcgcaattccattatgaacgatgtacaagaagtaatgtcg
aactgtttagctcatcaaagggcctttaagcaaatacaagaacttttgcagggaaataaa
gaaaagtggctcccagagttgaacgctgaaacaaatcaagcattctttcagttctgtatt
ctaccaaggactttattttcttctgccgacgcaatttacagtgcactgttcattgttgaa
ctttgtggtattcagaattctttcagtatcttcaaattttttgttgattctcatatcctt
ggtggtcttctgttctcctgtactgttactgagtcagctaatatgggctttttcactaat
gttttactaaatacttttgaaaaagctaggtctgaaggtgtctttgataactgcagcctt
gaggagatctatcgattacattctattatgataggagatttgactggtttgctagctgaa
tcgaattacatgtcaattaggaatagtattgaatttctcaatcaaatttcacataaattc
ccagttgttgatgagcatataaaggaactttgtcattctttggaatataagttagtcggt
gataatagagaagatataagattaccctgtaatgctttaattggtcacctcaaaagccgt
ctaaagaatgcttcccggaaacaagatttttatgagcttccggaggaggaattgttagaa
atccgtaaacttgatgaagaacgtatgctaatcaaaaaatatcaggagtcattagctcaa
gaagacgaagcaaagaagttggaagaggaaagtaagatgaatatattaaagcctctagat
gatagagtggagagcagatatatggcaaatacaggtgaagctgatagtacagacgcagaa
aagacgaaacagcaatcagaagctgtctcctgtcaactccatcagattttagataacatg
gaccaagtgctaaatctcctaagaactgaatcagctgaagaagcaccaagatttattaga
gtcgttttcttcaaaaatgaatttaagaaagttatcaatgactacaaaggtgaccttgaa
ggttttaggaaaaatattgctaatattttggttgactatttctacagtatggtgcagtgg
ccccaaagtaatccaacatttgtccagaaggcccgggatattaagacagcatgtttgaaa
tgtaatgcccctattagcaaggcaacgaagataaaggtgatggctgatgacctatatggc
gaagatatagcgtcctcctgggcaaccaatcccaaagcagctagaacaaatagagaaagt
cggtttgcaggtgctaaaccagtacctaacctaacttctgatacaagtacttcaaacgag
aacaagtggaagactgaacgagtggaaaaaactgcaatagacactagaaatacttcgaga
tatgccgatgaggatacaaagtcatcaacacaaaccaaaaaagatgacaagccatccggt
tcccgtttcaacaacggcaaggtgcccgttaaaaagcctgttgataataaacaagatcaa
aagccatccaacagtctacgtaacagagtcggttccagattcgaaggtaggcaagaaaac
agcactagattttctggccctagagcagaccctataagattccccacagcccctgcccgt
catgcagaacctgttaacgaaagtcgatttcgaaatatgcccaaagaactgtcacggaaa
cgagctgctgaagattacagatacggtgatagcaagcgtcagagacaggaagatgataat
cgaagaaaaccaaccaaagaaactcgtggagaacaacacccaactgctattctgagtcag
aagaaaggtggattcagtagatttcgataa

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