Eremothecium cymbalariae: Ecym_6383
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Entry
Ecym_6383 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_6383
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_6383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_6383
03041 Spliceosome [BR:
erc03041
]
Ecym_6383
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Ecym_6383
mRNA degradation factors
5'-3' decay
Lsm complex
Ecym_6383
Spliceosome [BR:
erc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
Ecym_6383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SymE_toxin
Motif
Other DBs
NCBI-GeneID:
11469143
NCBI-ProteinID:
XP_003647575
UniProt:
G8JUH8
LinkDB
All DBs
Position
6:join(747850..747861,747978..748325)
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AA seq
119 aa
AA seq
DB search
MSESDKPQQQQQQQGHQQQKKKFEGPKREAILDLAKYKDTKVRVKVMGGRLVIGILKGYD
ELMNLVLDETVEYLRDEDDSSVILEGKTRNLGLIVIRGTILLSLSPVAGGDLIAGPASN
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagagcgataagccccagcagcagcagcagcaacagggacaccagcagcagaaa
aagaagtttgagggtcccaagagagaggctattcttgatctagctaaatataaagatacc
aaggttagagtcaaagtgatgggtggacgcctggttattgggatattaaaaggttatgat
gagttgatgaacttggtattggatgagactgtcgaatatttaagagatgaagacgattct
tcggttatattggaaggcaaaactagaaatttgggattgatcgtaatcagaggaactatt
ttactgtctctatctccagttgcaggtggtgatctcattgcaggaccggccagcaattga
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