Eremothecium cymbalariae: Ecym_7144
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Entry
Ecym_7144 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_7144
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_7144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_7144
03041 Spliceosome [BR:
erc03041
]
Ecym_7144
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Ecym_7144
mRNA degradation factors
5'-3' decay
Lsm complex
Ecym_7144
Spliceosome [BR:
erc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
Ecym_7144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
11472452
NCBI-ProteinID:
XP_003647810
UniProt:
G8JVX8
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Position
7:complement(292916..293485)
Genome browser
AA seq
189 aa
AA seq
DB search
MLPLYLLTNAKGQRMLVELKNGETIEGELTNVDNWMNVTLGNVVHKGGEQVLELPEIYVR
GSVIKYIKLQDDIIDKVKQQLNSGKDGSSNGNGPHQNRDRDGNRRYNSRRDNGGGNNGGG
RFHHHDYQRKRGGGNFQRRGGGDGQYSSNNGGRRGARQQPGNNGTGNTQGQSSTASGGFV
QYHRPMQGA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgttatatttgttgaccaatgccaaaggccaaaggatgctggttgagttaaaa
aatggtgaaactatagaaggcgagttgacgaatgttgataactggatgaatgtaacgtta
gggaatgtggtgcataagggaggggaacaggtgttagagctgcccgagatctatgtgcgc
ggatcagtgatcaagtatatcaagctgcaggatgacattattgataaggtaaagcaacag
ttgaatagcggcaaggatgggagtagtaatgggaatgggccgcaccagaatagagacagg
gatggaaacaggagatacaatagtagacgggataacggcggagggaacaacggtggtggg
aggttccatcatcatgactatcagcggaagcgcgggggaggtaattttcagagaaggggc
ggtggggatgggcaatatagtagtaataacggcggtcgtcgtggagccagacagcagcct
gggaataatggtactggaaacacgcaaggccaaagtagtaccgcttctggtgggtttgtg
cagtatcaccggccgatgcagggagcatga
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integrated database retrieval system