Eremothecium cymbalariae: Ecym_7324
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Entry
Ecym_7324 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_7324
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ecym_7324
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
Pre-60S particles
Helicases
Ecym_7324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
11469732
NCBI-ProteinID:
XP_003647975
UniProt:
G8JWE3
LinkDB
All DBs
Position
7:complement(689228..691021)
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AA seq
597 aa
AA seq
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MSQSLTWDSLEYELQPWIKLAVEAMGFEAMTPVQASTIPLFAGNKDVVVESVTGSGKTVA
FVIPILEKIIKDGANSAAFRKGHFHSLIVSPTRELASQIQLVVQSFLNYYPDNCYPIRSQ
IIVGTNQVTVRDDVAEFMQNRPQILIGTPGRLLDFLKMVGVKTTSCGIVVLDEADKLLDY
NFGKDVDNILKFLPKQRRTGLFSATISSAGDEVFKTGMRNPVKISVKSHKKAPQSLKMNY
VVVEPEKKFELLLSILNYYRFKKCIVYLPTCISVTYFYAIIQHLTKLGQMDEDLKIYSLH
GKLQTTSRMKTLEKFTQDLNKSVLLTTDVAARGIDIPNIDLVLQMDPPTDTDIFLHRCGR
TGRANRVGKAIVLLNAGREEDYIPFLHVKNIELERTEISCKPIPGFNTIIKDWILEDRAR
FDLSIKVYVGFIRHYSKHTASSIFRLQTLDYVGLAKMHGLLRLPRMPEIQKYLNQDQMPE
EGWLIMPPINLATFAYADKQKEKARLQALKNTNEIIDKRKLKSQLKKNMAWSNKTTTKEN
KVERKTKLAQKRKAIEEQLARENSNSESEIEEDWKDIVRQRKKKKVDSQLQGAFGDL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatctcttacgtgggatagtttggaatatgaattgcaaccatggattaaatta
gcagttgaagcaatgggttttgaagctatgacacctgtacaagcgtccaccattccgctg
tttgcaggaaacaaggatgttgtagttgaatctgtaactggttcaggtaagactgttgca
tttgtgatcccaattctagaaaagattattaaagatggggctaatagcgctgcatttaga
aaaggccatttccattcactaattgtatcacctactagagagttagcctcgcaaatacaa
cttgttgtgcaatcgttcttaaattattatccagacaactgctatccgatacgttcccaa
ataattgttggtacgaatcaagtaactgtgagggacgatgttgctgaatttatgcagaat
agacctcaaattttgatcggaacccctggtcggttgttagattttctaaaaatggttggt
gtaaagaccacctcatgtggtatagttgtcttagatgaagcagataaactattagattat
aattttgggaaagatgtcgataatattctaaaatttcttccgaaacaacggaggacaggg
cttttctctgcaaccattagtagtgcaggtgatgaagttttcaaaactggtatgcgaaat
ccagtgaagatttcagttaaatctcacaaaaaagcaccgcagtccctgaagatgaactat
gttgtcgttgagcctgagaagaaatttgaactcttactttcgatattaaactattacaga
tttaagaaatgcatagtgtacctaccaacttgcatatcagtaacatacttttatgccata
atccaacaccttactaaattgggtcagatggacgaggatttgaaaatctattctttgcat
ggaaaactgcagacaacttcgaggatgaaaactttagagaaatttactcaagacctgaat
aaatccgtattgttgacaactgacgttgctgctagaggcatagacattccaaatattgat
ttagttttacaaatggaccctcccacagatacagatatatttttacacagatgtggtaga
acgggcagagcaaatagagttggaaaggcaattgtgctactgaatgctggaagagaggag
gattatataccatttttgcatgttaaaaatatcgaattagaacgtactgagatttcttgc
aagccaatcccaggatttaatacaataattaaagattggattctagaagaccgagcaaga
tttgacctcagtataaaagtttatgttggatttattcggcattactcgaaacatacagcc
tcgtcaatttttagattacagactctagactatgttgggctagcaaaaatgcatggactg
ctgcgtctaccacgtatgccagaaattcaaaaatatttaaatcaagatcagatgccagaa
gaaggatggttaataatgccgcctattaatctggcgacttttgcatatgctgacaaacag
aaagaaaaggcaaggttacaggcattaaagaatacaaatgaaatcattgataaaaggaag
ttaaaaagtcaactcaagaaaaatatggcgtggtccaataaaactacaactaaagaaaac
aaggtagaaaggaaaaccaaattggctcaaaagaggaaagcaattgaggagcaattggca
cgtgagaacagtaatagtgaaagcgaaatagaggaagattggaaagatattgtaagacaa
agaaaaaagaagaaggtagactcgcaattgcaaggtgctttcggtgatctatag
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