Eremothecium cymbalariae: Ecym_7460
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Entry
Ecym_7460 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_7460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_7460
03016 Transfer RNA biogenesis [BR:
erc03016
]
Ecym_7460
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
Ecym_7460
Transfer RNA biogenesis [BR:
erc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
Ecym_7460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIR2-like_ZnK4
zf-CCHC
zf-C2H2_10
GH115_C
Motif
Other DBs
NCBI-GeneID:
11469802
NCBI-ProteinID:
XP_003648096
UniProt:
G8JWR4
LinkDB
All DBs
Position
7:complement(943453..944625)
Genome browser
AA seq
390 aa
AA seq
DB search
MSALSEIESHDGLPFYKDKLPSFKDEEKLVAPSIEEVDNDPELLRNLRGHGRYFAVDDNE
DGIREEEPKCKNCSQRGHIKKNCPHVICSYCGSMDDHYSQHCPRTMRCSHCNESGHYRQH
CPQKWKRIFCTLCNSKKHSRDRCPSIWRSYCLLGSSQKRVLPSHKIYCYNCAGKGHFGDD
CPIERSSRVPNDDGSAFSGDNLASELRREYFSYLSKLKRESRASYGYVQPQSQNGPFGHR
PARETRDDQDDYDYEGEREEEDKYAINYDDYEVEEVHYNPKNKNNKKSRWQDGNSNGYSR
YNSTATTPQSNKNSLPTPASKGKLLQPPKKRRKHPLDFPRGGGGTANTSRYNQNINTSRY
APPAPYQNDLPHRNYNSYQPFRSGTLSRRR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcattgtcggagattgaatcgcatgatgggctacccttttataaggataagttg
ccatcattcaaggacgaagagaagcttgtagcaccatcaatagaggaggttgataatgat
ccagaactgttgagaaacctacgaggccacggaaggtattttgctgttgatgacaacgag
gatgggatcagagaggaggagccgaagtgcaagaactgttctcagagaggtcatataaag
aagaactgcccacatgtgatatgttcttattgtgggtcgatggacgatcactattcacag
cactgtccccggactatgcggtgttcgcattgtaatgaaagtgggcactacaggcagcac
tgtcctcagaaatggaaacggatcttttgcactctatgcaacagtaagaaacactccaga
gaccggtgtcccagcatatggaggagctactgcttgctaggctcctcccagaagagagtc
ctacccagccacaagatatactgttacaactgtgcgggcaagggccattttggcgatgac
tgcccaatcgaacgctcgtcgcgtgtgcctaacgatgacggcagcgcattctctggtgac
aacttagccagcgagctgagacgagaatacttttcctatctgtcgaagctgaagagagaa
agcagagcgtcctacggctatgtgcagccgcagtcgcagaatggaccctttgggcatcga
cccgctagggagacccgcgacgaccaagacgactacgactacgagggggaacgagaggaa
gaagacaagtacgccatcaactacgatgattatgaggtggaagaagtccactacaacccc
aaaaacaagaacaataaaaaaagcagatggcaggatggcaacagcaacggatattcccga
tacaattcgacagccacgacaccccaaagcaacaagaatagccttcccaccccagcatca
aagggtaagcttctacaaccacccaaaaaaagaagaaagcatccgttggacttcccccga
ggaggaggaggaaccgccaatacctcgcgctacaaccaaaacataaatacatctcgatac
gctccgccagccccgtaccagaacgacctgccacacagaaactacaactcataccagcca
ttccgcagcggcaccctttcgagaagacgttaa
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