Eremothecium cymbalariae: Ecym_8020
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Entry
Ecym_8020 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_8020
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Ecym_8020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
11469820
NCBI-ProteinID:
XP_003648133
UniProt:
G8JWU2
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All DBs
Position
8:52179..53834
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AA seq
551 aa
AA seq
DB search
MALKKVSKFPSDTKSISENVAKFHRNSSGSNYKKTKDKKLRAGLKRIDDQYKDAVATAAA
TDYLLPESQGYLEAEDEMEKTFKVSQAEIKQSVDVTTANKALDLKLNDFGPYQISYSKNG
THLLIAGRKGHIVSFDWRKGELRAELHLQETATAATYLQNEQYFAVAQKKYTFIYDHEGT
ELHRLKQHIEVKHMEYLPFHYLLATAGQTGFLKYQDVSTGQLVAEIRTKLGPTISMAQNP
WNAVVHLGHSNGTVTLWAPNMSTPLVRLLSARGPVTSMAIDRTGYYMATTGADKSLKIWD
IRNFKELHSVENLPTPGMNVRISDTGLLAVSRGPHVTLWKDSLKHGSSNRPYFTSSGLKN
RNTPYMSHIFEGNKVNSIEFVPFEDLLGVGHQKGVTNLIIPGAGEANYDALEINPYETVK
QRKEQEVRSLMNKLPADSIALDPNVIGTVDNRASHLRLTAKDLTEVTVQETNKSKTNSDI
PQVNPDIKSKNSGLRTFLRKKTQNVIDERKLRVQKQLQREKEGRQRRLNITRGEIAEDDK
DFVDEALGRFS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaagaaggtttcgaagtttccttcagatactaaaagtattagcgaaaatgtg
gctaagtttcataggaactcatccggttccaattataagaagactaaagataagaagctt
agagcgggcctaaaacgaattgatgatcagtataaggatgctgttgctactgcggcagca
acagactatctgttgcctgaatctcaaggttatttggaagcggaagatgagatggaaaag
acatttaaagttagtcaagccgagataaagcagagtgtggatgtcactacggctaacaag
gcattggatcttaagctaaacgattttgggccttatcagattagctattcaaaaaatggt
actcatttgctaatagctggtcgcaaggggcatattgtctcttttgattggagaaaaggt
gaactacgtgctgaattacatctccaagagaccgctacggcagcgacttacctacaaaat
gagcaatacttcgcggttgcgcagaagaaatatacattcatatacgatcacgaaggcact
gaacttcatcgtttaaagcagcatattgaggtaaagcacatggaatatttgccctttcat
tatctacttgctacagcgggccagactgggtttctaaaatatcaggatgtctcgactggt
caattagttgctgaaataagaactaaactggggcctacaatctctatggcacaaaatccg
tggaatgcagtagttcatctaggtcacagtaatggtactgtcactctatgggctcctaat
atgtcgactccgctagttaggttgctgtctgccaggggaccagtaaccagtatggctatt
gatagaacgggatattatatggctactacaggtgctgataaatctttgaaaatttgggat
atcagaaatttcaaagagttgcattccgttgaaaatctgccaactccaggtatgaatgtt
aggatatcagatactggattgctagctgtgagtagaggccctcatgtgacattatggaaa
gattccctgaagcatggttcttcaaatagaccatactttacatctagtggtctaaagaac
agaaacacaccctatatgtctcatatattcgaagggaacaaggtcaatagtattgaattt
gttccatttgaagacttactcggagttgggcatcaaaaaggagttacaaatctaattatt
ccaggtgctggtgaggccaattacgacgctttggaaatcaacccatacgagactgtaaaa
caaagaaaagaacaagaggttagatccttgatgaacaaattacctgcagattccattgcg
ttggatccaaatgtcatcggtactgtggacaatcgtgcttcccacctgagacttacagcc
aaggatttgactgaggttactgttcaggaaacaaataaatctaagacaaacagcgatatt
ccacaagttaatcctgatatcaaaagtaagaactctgggttacgtaccttccttcgtaag
aaaactcaaaatgttattgatgaaaggaaattgagagttcagaagcaactacagcgggaa
aaagaaggtcgtcagagaaggttgaatatcaccagaggagaaatcgccgaagatgacaaa
gactttgttgacgaagcattagggaggtttagttga
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