KEGG   Eremothecium cymbalariae: Ecym_8044
Entry
Ecym_8044         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
erc  Eremothecium cymbalariae
Pathway
erc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Ecym_8044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:erc03041]
    Ecym_8044
Spliceosome [BR:erc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    Ecym_8044
 Complex C
   U5 SnRNP specific factors
    Ecym_8044
SSDB
Motif
Pfam: WDR55 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML EIF3I Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd WD40_RFWD3 PQQ Beta-prop_VPS8 PALB2_WD40
Other DBs
NCBI-GeneID: 11471472
NCBI-ProteinID: XP_003648157
UniProt: G8JWW6
LinkDB
Position
8:97649..98584
AA seq 311 aa
MSESVCRLAGLHEGAALSCDSSRDGKMVISSGIDGKVGIWDVTGEGAQYEIDSGVVNTCV
RLWQGSSQLLAGCANGKVCIYDVETGRKMRQWGGGHKRVVNEIVGLCEEHLFGSVSDDGT
LCWWDSRVRKPVGRVVGEFPLLTLALGRRGDGDERSPFLYTSGVEPVVRCYDLRKNTDLI
AECETTHATGVSSLCVSSNGSRVCSLGFDDNLQFHDIDASGKLKNRQDGATIELPNSNRD
RFLSRCSLMEGVRYVLAYGYIIDIASAVIVSDKLQQAADGCQIIDMMYNESTKHALASCS
DGTVLLYSLEK
NT seq 936 nt   +upstreamnt  +downstreamnt
atgagtgagagtgtgtgccggttagcagggcttcatgagggagcagcactgtcgtgcgat
agttcgcgagatggtaagatggtgatctctagtggcatagatgggaaggttggtatttgg
gatgtaacaggagagggagcacagtatgagattgatagcggggttgttaatacatgtgtg
cgtttgtggcaaggctcgagtcagttgctggcagggtgcgcgaatggtaaggtgtgtata
tatgatgttgaaactggccgtaagatgaggcagtggggtgggggtcataagcgggtggtt
aatgaaatagttgggttatgcgaagaacatctttttggtagtgtgagtgatgacggaacg
ttgtgctggtgggattctagggttcggaagccggttggtagggttgtaggagagtttcct
ttgctaacgctggcgctgggacgacgtggtgacggtgatgagcgaagcccttttctctac
acatctggggtggagcctgtagttcgatgctatgacctgcgtaagaatactgatttaata
gcagaatgcgaaacaacgcatgcaaccggggtgtcttctctatgtgtctcttcgaatgga
tctagagtttgttcattggggtttgatgataatttacagttccacgacatcgacgcaagt
ggtaagctaaaaaatcgtcaggatggagcgaccatcgagttgcctaatagcaacagggat
cgatttttgtctaggtgctctttaatggagggtgtgcggtatgtcttggcatatggatac
attattgatattgcaagtgcggttatcgtttcggataaattacaacaagcagcagacggt
tgccagataattgatatgatgtataatgagagcaccaagcatgcactagcgtcatgttcg
gatggaacggttcttttatatagtttagagaagtaa

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