Eremothecium cymbalariae: Ecym_8104
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Entry
Ecym_8104 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K12853
114 kDa U5 small nuclear ribonucleoprotein component
Organism
erc
Eremothecium cymbalariae
Pathway
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_8104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
erc03041
]
Ecym_8104
Spliceosome [BR:
erc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Ecym_8104
Complex C
U5 SnRNP specific factors
Ecym_8104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
EFTUD2
EFG_III
MMR_HSR1
GTP_EFTU_D2
DUF4909
Motif
Other DBs
NCBI-GeneID:
11469869
NCBI-ProteinID:
XP_003648215
UniProt:
G8JX24
LinkDB
All DBs
Position
8:complement(221039..223882)
Genome browser
AA seq
947 aa
AA seq
DB search
MDEDIYDEFGNLLNEEQYDSDSDNHSGSFVSDSEVDHKSNNNGTMGDENVTDLTIRQPKL
SEVYGPDVEVLVETQDRDDVNLPLVQPYDTKRRVYNAVFTQLKRNIPKAAYDREYMLQLA
SSSERCINICVCGPLHSGKTSLMDILAIESHERLPYLSKAMKDGWKPLKYTDNIKLEIER
GLSMKLNGFTFIKQDSKAKSHVITVLDAPGHVNFLDETIITMAASDCCLIVIDVVEGINS
IVVSLIKRAQREKLPVLFVLNKIDRLILELKLPPRDCSLKLHKLVDQINIYTMQRYSPEL
GNIVFASAKFGIVFTIEQFVHYYYAHNVGSDTDKFVERMWGEVYFNAGKFSKNPNAKKEV
TFVQFMLNPLYKLISHTLSQSPTDLKSMLKKEFKVDLYSSFYNLDPLPLLRHILKLVFRD
SVSLLDSIVKYGATSEIKSSTIIPSSSTYTVAHVLKLMDYGGELWSLVRVYSGILKKGDL
VKLINESQDSEIIDEDEVPTINVEEMGLLGGRYVVPITQASRGQIVLIKGLDNYYLGKTA
TLFTEYSYSFPSTKFMNEPIFKIVVEPINPSELPKLVEGLNLIHKLYPGAVVKVEESGEH
VIIGTGELYLDVLMYDLRHNYANIEIKVSMPLVKFSEGCNNTSFAAIPVTSPNGLIKLSV
SAEPLKRDIIRDMINGKLQSAEFDNIKVLSKKLRTEYGWDSLAARNVWNFHNCNVFIDDT
LPDEVDKELVKSAKRQILQGFKWAVKEGPLAEEPIYGVSFKLLNFDITGDITNYSAQIIP
LVRRACYVALLTSEPILLEPIYEASILVYEVLIPVVEELLKKRRGSRIYKTDTIVGTPLV
EIKAQIPVIESIGFETDLRLATSGAGMCQMHFWNRIWRKVPGDVMDEDALIPKLKPAPIN
SLSRDFVMKTRRRKGLSSEGYQTNDGPTLEKYVDPDLYSKMKQNGLL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatatatatgatgaatttggcaatttgcttaatgaagagcagtatgattca
gattcggataatcactcaggcagctttgtttccgattctgaggtagatcataagagtaat
aacaatggtactatgggcgatgagaacgtgacggatcttactattagacaacccaaatta
tcggaagtatatggccccgatgtggaggttctagtggaaactcaagatcgtgatgatgta
aaccttccactagttcagccatatgacacgaagcggcgagtttacaatgctgtgttcact
cagttgaagagaaatattccaaaggcagcatacgacagagaatacatgctgcaacttgct
tcatcttcagagcgctgcattaatatctgtgtttgtggtcctttgcactcagggaagacg
tcgcttatggatattttggcgatagaatcacatgagagattaccatatctgtctaaggct
atgaaagatggttggaagccgttaaaatatacggacaatatcaaattggagatcgagagg
ggtttatcaatgaagttaaatggatttacttttattaaacaagactccaaggctaaatct
catgtaatcactgtcttggatgcaccgggacatgttaacttcttggatgagactataatt
acaatggctgccagcgattgctgtttaatagtcatcgatgttgttgaaggcataaattcc
attgtggtttcattaattaaacgtgcacaaagagaaaaactcccggtattattcgttttg
aataagattgacagattaatactagaattgaaactccctcctagagattgctctttaaag
ctacacaaactcgtggatcaaattaatatatatactatgcagagatattctccagaattg
gggaatattgtatttgcatcagccaaattcggtattgtttttactattgagcaatttgtt
cactattattatgctcacaacgtagggtcagacacagataaatttgttgaaagaatgtgg
ggggaagtttatttcaatgcaggcaaattttccaaaaatccaaacgctaagaaggaagtc
acatttgtacagttcatgttgaaccctctctacaagttaatttcgcatacattatcacaa
tcccccacggacttgaagtctatgttgaaaaaagaatttaaggtcgatctctattctagt
ttttataaccttgatccattacctttgctgcgacatatacttaaactggtatttcgcgat
agtgtcagccttttggattctattgtaaaatatggcgctacatcagaaattaagtcctct
accataataccaagctcttctacatatactgttgcacatgtccttaaattgatggattat
ggcggcgaattatggtctttagttcgtgtttacagcgggatacttaaaaaaggtgacttg
gttaagttaattaacgagtctcaagactccgagattatagatgaagacgaagtccccaca
attaatgttgaagagatgggcttgctaggtggcagatatgttgttcccattacgcaggca
tcaagaggacaaattgttctgataaagggtctagacaattattacttgggaaaaactgca
actttatttacagagtattcttacagtttcccgtcaaccaagtttatgaatgaaccaatc
tttaaaatagttgtggagcccatcaatcctagtgaacttccaaagctggtagagggctta
aatctaattcacaaattatatcctggtgcagttgtaaaagtagaagagagcggagaacat
gtcattattggaacaggtgagttgtatttggatgttttaatgtatgatcttcgtcataat
tatgcaaatattgagataaaagtatctatgccacttgttaaattttcagaaggatgcaat
aacacttcttttgcggcaattcctgtcacttcacccaacggtttgattaagttgagtgtt
agtgcggaaccgttaaagcgtgatataatccgtgacatgatcaacgggaagttacagagt
gctgaattcgacaacattaaagttctatcaaaaaaattgcgaactgaatatggttgggac
tctctagccgcaaggaacgtgtggaatttccataattgtaatgtattcatcgatgacacg
ctacctgacgaagttgacaaggagttagttaagtccgctaagcgtcaaattttgcaaggg
ttcaagtgggccgttaaggaaggtccattagcagaagaaccaatatatggtgtctctttc
aaacttttgaattttgatattaccggtgatatcacgaattactctgcgcaaataatccct
ctagtccgtagagcttgttatgttgcgttgctaacttccgaaccgatactcctagagcct
atatacgaagcaagcatcctagtgtacgaggtcttaatcccagttgtagaagaactgttg
aagaagaggcgtggttctcgcatttacaagaccgacacaattgtgggcactccgttggtg
gagataaaagcccagatacccgtaattgaatccattggctttgaaaccgatttaaggtta
gcaactagcggtgcgggtatgtgtcagatgcatttctggaaccgtatatggagaaaagtc
cctggcgacgtgatggatgaggatgcactaataccaaaactaaaaccagctcctatcaac
agtttaagtagagatttcgtcatgaaaacaagacgtaggaaaggcctctcttccgaagga
tatcagaccaatgatgggcctacactagaaaaatatgttgatcccgacctctactccaaa
atgaaacagaatggcttgctttaa
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