Eremothecium cymbalariae: Ecym_8358
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Entry
Ecym_8358 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_8358
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ecym_8358
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
90S particles
Helicases
Ecym_8358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
DUF3173
Motif
Other DBs
NCBI-GeneID:
11471550
NCBI-ProteinID:
XP_003648448
UniProt:
G8JXQ7
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All DBs
Position
8:719978..721687
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AA seq
569 aa
AA seq
DB search
MDIFRVLTRGASVKKQGKEVDHSHFHDKQVGQLKKADDETQLTKELDFFRNKRILNAVES
KKRDVSFHLDEVEVNLESSSPPQKISSAEDAAKLRKCYKGNVSGPDIPLPIGSFEDLITR
FELDKRLLNNMIQNYFTNPTPIQCEAISMCLNERDIIACAPTGSGKTLAFLIPLIQQVIS
AGEVDSGVKGLIISPTKELASQIFTECSKLSHRIFLEKRRPLNVALLSKSLSGKLKNKVV
SDKKYDIIVSTPLRLIDLVKERALDLSCVKHLIFDEADKLFDKTFLEQTDDILSSCSNNK
LQKSMFSATIPSHVEEIAQSIMMDPIRIIIGHKEAANTNIEQKLVFCGNEEGKLIAIRQL
IMEGEFRPPVIIFLESITRAKALFHELVYDKLNVDVIHAERTQMQRDKIIERFKSGDLWC
LICTDVLARGVDFKGVNLVINYDIPRSAQAYVHRIGRTGRGGMKGKAVTLYTKQDAIAIK
PIVNVMKQSGCDVVEWLDKASRMSKKEKNMIKKGSAFSNRKQISTVPKIIKQKKRQKVEM
VNASKRRKAQSTSLKDSENSNETTSAQSS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttagggttttaactcgaggtgcttctgtgaaaaaacaaggcaaggaagtt
gatcattcacatttccatgacaagcaagttggtcagctgaagaaggcggacgatgagacc
caattgacgaaagaactagacttcttccggaataagaggatcttgaatgctgtggagtcc
aagaagagagatgtgagttttcatcttgatgaggtggaagttaatttagaatccagttca
cctcctcaaaaaatcagtagcgcagaggatgcagctaagttgagaaaatgctataaaggg
aatgtatcaggaccagatattccgctgcctattggatcgttcgaagatttaattactaga
tttgagcttgataagcgtttgttgaacaatatgattcagaattactttaccaatccgact
ccaattcaatgtgaggctatttctatgtgtctgaatgagagagatattatagcttgcgct
ccaactggttcagggaaaacgttggcatttttgataccattgatacagcaggttattagc
gcaggggaagtggattctggggtcaaaggtctaattatttcaccgaccaaggaattagct
agtcagatttttactgaatgttccaaattatctcatagaatatttctagagaagcgtcgt
ccacttaatgttgcattgctttcaaagtctttgagtgggaagttgaagaacaaggttgtc
agcgataagaagtacgacatcattgtgtccacgcccttaagacttattgatcttgtgaaa
gagagagctcttgacttgagctgtgtcaagcatctaatttttgatgaggcagacaagtta
tttgacaagacctttttggagcagactgatgacatcttgagttcgtgtagcaacaacaaa
ctacaaaaatcgatgttctctgctactattccctcccatgtcgaagaaatagcacagtcg
atcatgatggatccaattagaatcattattggtcacaaagaagctgcaaacactaatata
gaacaaaagttggtcttctgtggcaatgaggaggggaaactaattgcaatcagacagcta
ataatggagggagagtttcgccctccagttattattttcctagaatccatcacaagagct
aaagcattattccatgagctcgtatacgataagttgaatgttgatgtcattcacgctgaa
aggacacagatgcaaagagataagataattgaaagattcaaatctggtgatttgtggtgc
ttaatttgtacagatgttttggcccgtggtgttgactttaaaggtgttaaccttgttata
aactacgacatcccaagatccgcacaagcatatgtccacaggatcggtagaactggtaga
ggtggaatgaagggtaaagccgtcaccctctatactaaacaagatgcgatcgcaatcaag
ccgatagtgaatgtgatgaagcaaagtgggtgtgatgtcgttgaatggttggataaagct
tccagaatgagcaagaaggaaaagaatatgattaagaagggtagtgcttttagtaacaga
aagcaaattagtactgttccaaaaattataaagcagaagaaaagacaaaaagtagaaatg
gttaatgcctctaaaaggagaaaagcccaatcgaccagtctaaaagattcagaaaacagc
aatgaaacaacaagtgcccaaagctcttga
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