Eremothecium cymbalariae: Ecym_8406
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Entry
Ecym_8406 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03040
Spliceosome
erc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_8406
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Ecym_8406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
erc03041
]
Ecym_8406
04121 Ubiquitin system [BR:
erc04121
]
Ecym_8406
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_8406
Enzymes [BR:
erc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Ecym_8406
Spliceosome [BR:
erc03041
]
Complex B
Other components
Prp19 complex
Ecym_8406
Complex C
Prp19-CDC5 complex
Ecym_8406
Ubiquitin system [BR:
erc04121
]
Ubiquitin ligases (E3)
U-box type E3
Ecym_8406
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
Ecym_8406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp19
WD40_Prp19
U-box
Motif
Other DBs
NCBI-GeneID:
11470019
NCBI-ProteinID:
XP_003648493
UniProt:
G8JXV2
LinkDB
All DBs
Position
8:join(841291..841303,841394..842937)
Genome browser
AA seq
518 aa
AA seq
DB search
MFCAISGKQPKIPVISPVSRCVFEKSLIEQYVEENGVDPISNTALNKEQLIEISQTPQQY
ALSNSVNSATLNANYSIPNLLSTLQNEWDALMLENFELRNHLDICKKELSATLYKCDAAI
RVAARATQERDDLRHTLTQLTEAVGSEAAEPVKYPARKAPDIIQLPELLLEELVGESQSY
VMKTKNQSKLKPKPVVSLNIEKMEQQNNSFDVSKVFTNRLINPADRVTVVLSESDVRLII
DDEFVLLKNLPTQLQIAYPIGEQRVVFVGEQVLGVYNSLTSEIQSFKNTVQGHIQSVQYS
SNIAPNYFITLNDKHQIYYTSLDGSNVYQLTDGSPYFDATSYSRNLQLHKDGLLLAYQTN
NTSIAIFSVQTPSEHPTILEVELTDSESDSIVNFRFAPNGYWLYVQSKFEFHVYDLRKED
VTLAMDKLKFDAPILTDFETDETGKGLYLHTTECSIKSYSYVKSKHCWVSGISYPIDLLT
DHEVTYCEDTQGRYLRAFVYPSEKENGMLLCSVKIRIS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgccatcagcgggaagcaaccaaagattcctgtgatatcacctgtttcaaga
tgcgtttttgaaaaatcgctgatcgaacaatatgttgaagaaaatggcgttgatccaata
tcaaatactgccctaaataaagaacagcttattgaaatctctcaaactccccagcaatac
gcattgagtaactctgtgaactcagcaacactcaatgcaaactatagcattccaaatctg
ctttccactctacaaaatgaatgggatgcccttatgttggaaaactttgagctgagaaac
catctggacatctgcaaaaaggaattatccgccacattgtataaatgcgacgctgctatt
agggtagccgcccgtgcaacgcaggaaagagatgatttaaggcatactttgacacaattg
acggaagcagttggtagcgaagctgcagaacctgttaaatatcctgctaggaaagctcct
gacattattcagttaccggaacttttactagaggagctagttggtgaatctcagtcatat
gtaatgaaaacaaaaaaccaatcaaaactaaagccaaaacctgtggttagtttgaatatt
gagaaaatggagcaacaaaacaatagttttgatgtatctaaggtgtttactaacagactt
attaatcctgctgatagagtaacggttgtgctgagtgaaagtgatgtaagactaattata
gacgacgaatttgtattgctgaagaatctacctacccaattgcagatagcctacccaatt
ggagaacaaagagttgtgtttgttggtgaacaagttcttggtgtatacaattctctcaca
agtgaaatccaaagttttaaaaatacagtacaaggccatatacagtcagtgcagtactct
tcaaatattgccccgaattattttatcactttgaatgataagcaccaaatatattacact
tctttagatggctccaatgtttaccaactaactgatggtagtccatatttcgatgcaaca
agttattcacgcaatttacaacttcacaaggatggcttacttttggcgtaccaaaccaat
aatacatcaatagcaatttttagtgtacaaacaccttctgaacatccaactatattagaa
gtagaattgacggactcggagtctgattcaatcgtaaactttaggtttgcgccaaatggt
tattggttatacgtacaatccaaatttgaattccatgtctatgatttgagaaaagaagat
gttacgctagcgatggacaaattaaagtttgatgctccaatccttacagattttgaaacc
gatgagacagggaaaggactttatctgcacactacagaatgcagcataaaatcgtattca
tacgtcaaatctaaacattgttgggttagcggtatttcatatccaatcgacttgttgact
gatcacgaagttacgtactgtgaggatacacagggaagatatctccgagcgttcgtgtat
ccatctgaaaaggaaaatggaatgctcctttgttctgtgaaaatacggataagttaa
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