Erysipelothrix sp. HDW6C: G7062_06535
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Entry
G7062_06535 CDS
T06512
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
erd
Erysipelothrix sp. HDW6C
Brite
KEGG Orthology (KO) [BR:
erd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erd03019
]
G7062_06535
Messenger RNA biogenesis [BR:
erd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7062_06535
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cbl_N3
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QIK69964
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All DBs
Position
1367195..1368133
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AA seq
312 aa
AA seq
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MKIKEYTSGLKTSNAMLIARYTRGVTQNGAPYLSITFQDSSGEIEGKIWDVKAEQEARIQ
VGLIAEVKFDVNQYKQALQLRVHDLEIKDQKNYVLEEFVNAGQFDINFLRSEITAMIETI
ADPIIKDLVVANMDAVGEQFYQYPAATRNHHDFVGGLATHVYGMAKLAESVCELYPIYNR
DLLLAGVILHDMGKIEEYTAPLLSEYSVAGRLLGHISIMQANFTMIATQLGYADKEQTLL
LRHMILSHHGQLDYGSPVMPMVKEAEMLNFIDNMDARTNMFDKFYGDLGEGEFSSRMFAL
DNRNFYKAKGVK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattaaagaatatacaagtggtttaaaaacaagtaatgcaatgttgattgcgcgc
tatactcgtggagtaacacaaaatggtgctccatatttatccataacatttcaagacagc
tctggagagattgagggaaagatttgggatgttaaagcggaacaagaagcacgcattcaa
gttggcttgattgcagaagtgaagtttgatgtaaatcaatacaaacaagcacttcaactc
cgcgtccatgatcttgagattaaagaccaaaagaactatgttttagaagaatttgtaaat
gcgggccagtttgatattaactttctaagaagtgaaatcacggcaatgattgaaacaatt
gcagacccaatcattaaggatcttgttgttgcaaacatggatgctgtaggcgagcagttc
taccagtatccagcagcaacacgcaatcatcatgattttgtaggtggattggcaacgcat
gtatacggcatggctaaacttgcagaatcagtatgtgaactttatccaatctataaccgt
gatctcttgcttgcaggcgttatcttgcatgacatggggaaaattgaagagtacacagcg
cctttattgagtgaatattcggttgcgggacgtttgcttgggcatatatccattatgcaa
gcaaactttaccatgattgctacacaacttggttacgctgataaagaacaaaccttattg
ttgcgtcacatgattttgtcgcaccacggtcaacttgattatggttctcccgtaatgcca
atggttaaagaagcagaaatgttgaatttcattgacaatatggacgcacgcacaaatatg
tttgataaattctatggtgacttgggtgaaggagaattcagttcgcgcatgtttgcactc
gataatcgtaatttttataaagcaaagggtgttaagtaa
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