Erysipelothrix sp. HDW6C: G7062_06935
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Entry
G7062_06935 CDS
T06512
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
erd
Erysipelothrix sp. HDW6C
Pathway
erd00521
Streptomycin biosynthesis
erd00523
Polyketide sugar unit biosynthesis
erd00525
Acarbose and validamycin biosynthesis
erd00541
Biosynthesis of various nucleotide sugars
erd01100
Metabolic pathways
erd01110
Biosynthesis of secondary metabolites
erd01250
Biosynthesis of nucleotide sugars
Module
erd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
erd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G7062_06935 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G7062_06935 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G7062_06935 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G7062_06935 (rfbB)
00525 Acarbose and validamycin biosynthesis
G7062_06935 (rfbB)
Enzymes [BR:
erd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G7062_06935 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
Sacchrp_dh_NADP
Methyltransf_11
Methyltransf_31
KR
Methyltransf_25
Statherin
Motif
Other DBs
NCBI-ProteinID:
QIK70034
UniProt:
A0A6G7XZI6
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All DBs
Position
1447603..1448619
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AA seq
338 aa
AA seq
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MKYLVTGGAGFIGSNYVFYLLDSKEIDVVCLDNLTYAGNLSTLKDVMDHPRFKFVKGDIT
DREFINKLFEDEKFDVVVNFAAESHVDRSIDNPAIFLETNVMGTQILLDAALKHDIKRYH
QVSTDEVYGDLPLDRPDLFFTEDTPLRTSSPYSSSKAGSDLLVQSYYKTYGLPITISRCS
NNYGPYQFPEKLIPLIISRALADEKLPIYGTGENVRDWLYVTDHCKAIQLIIENGTVGDV
YNIGGHNEFSNLDVVKIILERLHKPESLITYVSDRKGHDMRYAIDPEKIHRELGWLPETP
FAEGINLTIDWYLNNKEWWEEILSGEYQNYYEKMYGQE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttagtaacaggtggagctggatttattggctcgaattatgttttttatctt
ttggatagtaaagaaattgatgttgtttgtttggataatttaacctatgcaggaaatctc
tcaacattgaaggatgttatggatcatccccgatttaaatttgtaaaaggggacatcact
gatcgtgagtttatcaacaagctttttgaagatgagaagtttgatgttgtcgttaacttt
gctgcggaaagccatgttgaccgctcaattgacaatcctgcaattttcttggaaacaaac
gtcatgggaacacaaattctacttgatgctgcattgaagcatgatattaaacgatatcac
caagtatcgaccgatgaagtttatggtgatcttcccttagatcgtcccgacttgttcttc
actgaagatacacctcttcgcacttcatcaccatactcaagttcgaaggctggatctgac
ttgcttgttcagtcatattacaagacttatggtttaccaatcacaatcagccgttgttca
aataactacggaccttaccaattcccagaaaaattaattccacttattatcagtagagcg
cttgctgacgagaagttaccaatttatggaaccggtgagaatgttcgagattggttatat
gttaccgaccattgtaaagctattcaactaattattgaaaatggaacagttggtgatgtc
tacaatattggtggtcataatgaattttcaaaccttgatgtcgtaaaaataattttagaa
cgattgcataaacctgaaagtctcattacctatgttagtgaccgtaagggacatgacatg
cgctatgcaattgatcctgagaaaatccatcgtgagttaggatggttacctgaaacgccg
ttcgcggaaggaattaatctgacgattgattggtatttgaataacaaagagtggtgggaa
gaaattcttagtggtgaatatcaaaactattacgagaaaatgtatggacaagagtaa
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