Erysipelothrix sp. HDW6C: G7062_07610
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Entry
G7062_07610 CDS
T06512
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
erd
Erysipelothrix sp. HDW6C
Brite
KEGG Orthology (KO) [BR:
erd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erd03019
]
G7062_07610
03009 Ribosome biogenesis [BR:
erd03009
]
G7062_07610
Enzymes [BR:
erd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7062_07610
Messenger RNA biogenesis [BR:
erd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7062_07610
Ribosome biogenesis [BR:
erd03009
]
Prokaryotic type
rRNA helicases
G7062_07610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
NAT10_TcmA_helicase
BEN
PRAI
DUF6506
Motif
Other DBs
NCBI-ProteinID:
QIK70160
LinkDB
All DBs
Position
complement(1587537..1588865)
Genome browser
AA seq
442 aa
AA seq
DB search
MNLLNKKLFEKNNFKELTSVQSKVLKEISKKRDLIVKSDTGTGKTHAFLFAILELIDPNL
VQTQAIILAPTRELAMQIFEFSKDIMEIEPLISIDLAIGGMDNTRLNGKVSKQPHILIST
PGKLVDILSWNVLRLDYVKTLIVDETDMMLDYGFLEEVDGIASKLQNNALFMLYSATIPK
GLRAFVKKYLNNPIEIVSEEEVLKPRIEHILVNQRHRNMPEAVLDVLSVINPLLAIVFTN
TKVQAVEVANYLRDYGIDCVEIHGDVSDRGRKQVISRINSKKVQYIVATDLAARGIDLPE
ISHVINAGLPNHDLDFYTHRTGRTGRSGREGFAISIVGPKDQSAVAKLMKQGFSFEYKRI
KDGTLEEVRPFYNIQKRTKQLDPEVVQILHRKNVTVKPGYRRKRKMEIESLMQKKRRDMI
RNEIREQKKERARARQKEKESI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcaataaaaaactttttgagaaaaataactttaaggaattgacatcagtt
caaagcaaagtcctcaaagaaatctcaaagaaacgtgatttaattgttaaatctgataca
ggtactggtaaaacccatgccttcctttttgcgattttagaacttattgatcccaattta
gtgcaaacacaagcaataattttagcgccaacccgtgagttggcaatgcaaatctttgaa
ttctccaaggatattatggagatagaaccacttattagtattgaccttgcaatcggaggt
atggacaacacccgccttaatgggaaagtctcaaagcaaccccatattttaatctctaca
ccaggtaaactggtcgatattttatcatggaacgtgcttcgattggactatgtaaaaaca
ttaattgttgatgagactgacatgatgcttgactatggcttcttagaagaagttgatgga
attgcctcaaaacttcaaaacaatgccctcttcatgctttatagtgcaacgatccctaag
gggttgcgcgcatttgtaaagaaatatcttaacaatccaatcgagattgtctcagaagaa
gaagtcttaaaaccacgtatcgaacacatcttggttaaccaacgccatcgtaacatgcca
gaagcagtattggatgtcctcagtgtcatcaatccactccttgcgattgtatttacaaat
acgaaagtacaagctgttgaagtagcaaattacttacgtgactatggcattgattgtgtt
gaaattcatggtgatgtgagtgaccgtggtcgtaaacaagttatcagtcgaattaatagc
aaaaaagttcaatacattgttgcaaccgatttggctgcgcgtggtattgaccttcctgaa
attagccatgttattaatgctggattgccaaatcatgatcttgatttctatacccaccgt
acagggcgtacagggcgaagtggtcgtgaagggtttgcgattagtattgtaggtccaaag
gatcaaagtgctgttgcgaagttaatgaaacaaggatttagctttgaatacaaacgtatt
aaagatggtacattagaagaagtgcgaccattctacaatattcaaaaacgtaccaaacaa
ctagatccagaagttgtacagattttgcatcgtaagaatgttaccgtaaaacctggatac
cgacgcaaacgtaaaatggaaattgaaagcctcatgcaaaagaaacgtcgcgatatgatt
cgcaacgaaatacgtgagcaaaagaaagagcgtgcccgtgcacgccaaaaggaaaaagag
tcgatttaa
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