Erysipelothrix sp. HDW6C: G7062_07620
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Entry
G7062_07620 CDS
T06512
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
erd
Erysipelothrix sp. HDW6C
Brite
KEGG Orthology (KO) [BR:
erd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G7062_07620 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erd03021
]
G7062_07620 (rpoD)
Transcription machinery [BR:
erd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7062_07620 (rpoD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Cap17-like_N
Motif
Other DBs
NCBI-ProteinID:
QIK70162
LinkDB
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Position
complement(1589521..1590906)
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AA seq
461 aa
AA seq
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MTRKKLKTLDEVKESFLKEFEKKQVLLNENVEKSIAHLSLGDEDTEELFQWFADNSIVLS
DGEDDVPEILEEDLIDEEADDVAEEYLGEGDDEGEGPFDDSLNKVDLSSYENELTSANLV
RINDPVKMYLKEIGRVNLLDAKDEPEIARRLQEGEEARQLIINIYRERYAEEATDEEFEE
LLETIKIEEIFEILKDHFVDDEANLAYIDNCEQTYYDGLEARRILISANLRLVVSIAKKY
VGRGMLFLDLIQEGNMGLVKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPV
HMVETINKLTRIQRSLVQTLGREPTAEEIAAEMENMTPEKVREIQKIALDPVSLETPIGE
EDDSHLGDFIEDKDALSPDDYANNQLLKEEINMVLEGLTEREEKVLRLRFGLEDGRTRTL
EEVGKEFNVTRERIRQIEAKALRKLKHPTRSKRLRDFVDKR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtaaaaagttaaaaactctggatgaagtaaaagagagtttcttaaaagagttc
gaaaagaaacaagtgttgttgaatgaaaatgttgagaagtcaattgctcacttgagtttg
ggtgatgaggacacagaagaactgtttcaatggttcgctgacaacagcattgttctatca
gatggtgaagacgatgttcctgagattcttgaagaagatctcattgacgaagaagccgat
gatgtcgccgaagagtacctcggcgagggagatgatgaaggtgaaggaccttttgatgat
tctctaaataaagttgacctgagttcgtatgaaaatgagctgacaagtgcaaaccttgtt
cgaattaacgatcctgtaaaaatgtatttgaaagaaatcggtcgtgttaacctcttagat
gccaaagatgagccagaaattgcccgtcgattgcaagaaggtgaagaagcgcgtcaactt
attataaacatctaccgcgaacgttatgcagaagaggcaacggatgaagagtttgaagaa
ttgcttgaaacaatcaaaatcgaggaaatctttgaaatcttgaaagaccacttcgtagat
gatgaagcaaatctagcctacattgataactgtgaacaaacatactatgacggtcttgaa
gcgcgtcgtattctgatttctgctaacttgagacttgttgtttcgattgcaaagaaatat
gttggacgcggcatgctgttcttggatcttatccaagaaggaaatatgggacttgttaaa
gctgttgagaaatttgactacaccaaagggtttaaattctcaacatatgcaacatggtgg
attcgtcaagcaatcacccgtgccattgctgaccaagcgcgcacaattcgtattcctgtt
cacatggttgaaaccattaataagttaacacgtattcaacgatcacttgttcagacatta
ggtcgtgaaccgacagcggaagaaattgctgcggaaatggaaaacatgacccctgaaaaa
gtacgagaaatccaaaaaattgccttggatcctgtgtcattggaaacaccgattggtgaa
gaagatgactcacatcttggtgactttattgaagataaagatgcattatcaccggatgac
tatgcaaataatcaacttcttaaagaagaaatcaatatggtccttgaaggtttaacagaa
cgtgaagaaaaagtacttcgtttgcgttttggacttgaagatggccgtacacgaacactt
gaagaagttggtaaagagtttaacgttacgcgtgagcgtatccgtcaaatcgaagcaaag
gcattgcgcaaattaaaacatccaacgcgttcaaaacgcttgcgtgattttgtcgataaa
cgatag
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