Erysipelothrix sp. HDW6C: G7062_10880
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Entry
G7062_10880 CDS
T06512
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
erd
Erysipelothrix sp. HDW6C
Pathway
erd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7062_10880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erd03019
]
G7062_10880
03009 Ribosome biogenesis [BR:
erd03009
]
G7062_10880
Enzymes [BR:
erd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7062_10880
Messenger RNA biogenesis [BR:
erd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7062_10880
Ribosome biogenesis [BR:
erd03009
]
Prokaryotic type
rRNA helicases
G7062_10880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
Helicase_RecD
Flavi_DEAD
UvrD-helicase
AAA_22
Cas3-like_C_2
Phage_integrase
GTP_EFTU_D2
Motif
Other DBs
NCBI-ProteinID:
QIK70767
UniProt:
A0A6G7Y2D1
LinkDB
All DBs
Position
complement(2259479..2260939)
Genome browser
AA seq
486 aa
AA seq
DB search
MNKFRKLNIGDDVVRALEVIGYTEPTEVQEAAIPHILNGEDLVIKSQTGSGKTASFGIPI
AEMIEWEERRPQALVLTPTRELALQIRDEIFSIGRFKRLKVQAVFGKSSFEIQQRDLAQM
THVVVATPGRLIDHINRRTIDLRQIDTVIIDEADEMFNMGFIEQVEEILRKVPRTSSTIL
LSATLPESIAALASAYLNDPTYIEVENENSVGERIDQQYYRIQANEKLEILRDVLTVENP
DSSIIFCNTKIEVDNVADALWDMGIKVETLHGGMEQRHRTKVINDFKHGMFRYLVATDVA
SRGLDIDDVGLVVNYDIPDHAEIYTHRIGRTARVEKEGKAISFVTPYDSKGWEYITDERE
FELQSVVRPGRSLVADRKPQFISKMNRKPKVKKSKDHNFKSEIAKLHIKGGKKQKLRAGD
VVGAIASISGIEAGDIGVIEVLEESTYVEILNNKGSDVLKVLKEAPIKGKVRRVEIANKN
EYEKQY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttagaaagttaaacattggtgatgatgttgtccgtgccttggaagtcatt
ggatatacagaacccactgaagtacaagaggctgcaattcctcatattttaaatggtgag
gatctcgttatcaagtctcagactggtagtggtaaaactgcgtcgtttggaattccaatt
gcggaaatgattgaatgggaagagcgacgtccacaagccttagtactcactccgactcgt
gaattagcattacaaatccgcgatgaaatctttagtatcggtcgttttaaacgacttaag
gtacaagcggtatttgggaaatcatcctttgaaatacaacaacgtgatttagcacaaatg
acccatgttgttgtggcaacaccgggtcgtcttattgatcacatcaaccgtcgtacgatt
gatttgcgtcagattgatacggtcatcattgatgaagcagatgaaatgttcaacatggga
ttcattgaacaagttgaagaaattctgcgaaaagtaccgcgtacaagcagtacaatttta
ctgtcggcaacattgccagaaagtatcgcagctttagcatcagcgtatcttaatgatcca
acctatattgaagttgaaaatgagaacagtgttggtgagcgcattgaccaacaatattac
cgtattcaagcaaatgaaaaacttgaaatactgcgtgatgttctgacggttgaaaatccc
gatagcagtattatattctgcaatacaaaaattgaggttgataatgtagccgatgcattg
tgggatatgggaattaaagttgaaacccttcatggtggtatggaacagcgtcatcgtaca
aaagtcattaatgattttaaacatggaatgttccgttacttagtggcaaccgatgtcgca
tcacgcggattggatattgatgatgttggtttggttgtaaactatgatattcctgaccat
gcagagatctatacgcatcgaattggccgtacagcccgtgtagagaaggaaggtaaggca
atatcgtttgtaacgccttatgactctaaaggatgggaatacatcactgatgagcgtgaa
tttgagttacagagcgtcgttcgaccaggtcgttcacttgttgctgaccgaaaaccgcaa
tttatcagtaagatgaatcgcaagccgaaagtcaaaaagtcaaaagaccataacttcaaa
tcggaaattgcgaaacttcatatcaagggtggtaagaaacaaaaactacgcgcaggtgat
gtggtaggggcgatcgcaagtatctcaggtattgaagcaggagacattggtgtcattgag
gttcttgaggaatcgacctatgttgagattctcaataataaaggatcggacgtcttaaag
gttcttaaagaagcacccatcaaagggaaagtgcgtcgtgttgaaattgctaataaaaat
gaatatgagaaacagtactag
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