Agathobacter rectalis ATCC 33656: EUBREC_1560
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Entry
EUBREC_1560 CDS
T00909
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ere
Agathobacter rectalis ATCC 33656
Pathway
ere03030
DNA replication
ere03410
Base excision repair
ere03420
Nucleotide excision repair
ere03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUBREC_1560
03410 Base excision repair
EUBREC_1560
03420 Nucleotide excision repair
EUBREC_1560
03440 Homologous recombination
EUBREC_1560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ere03032
]
EUBREC_1560
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_1560
Enzymes [BR:
ere01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EUBREC_1560
DNA replication proteins [BR:
ere03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EUBREC_1560
DNA repair and recombination proteins [BR:
ere03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EUBREC_1560
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUBREC_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
XPG_I
DNA_polI_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
ACR75304
UniProt:
C4Z982
LinkDB
All DBs
Position
1443897..1446608
Genome browser
AA seq
903 aa
AA seq
DB search
MSEKLVLIDGHSILNRAYHGLPDLTNSEGLHTNAVYGFLNIMFKILDEEKPDYLTVAFDV
HAPTFRHRMFDAYKGTRKPMDEELRQQVPMIKEMLTAMGIKIVEKEGYEADDILGTLSVR
AEKAGMDVAIISGDRDLLQLATDHVMVRIPKTKKTGTEIENYNTADVIEKYGVTPKEFID
VKALQGDTSDNIPGVPGIGEKTAGALIAKYHCIEAVHEDAENVKPPRASKNIVEYWEQAL
MSKELATIILDAPVDYEFSDAKLSGGVESLYTEEAFLLCKRYEFKNMLSRFNVEAPKNNA
EEHFVVVRDLKTAESVFEKAKDREVAFAVVPGESLENSESDGQLSLFSEPVSNDYLAVSI
CFSEEDIYFICTGDEISSSFLDEKLNTLEVKSWISPDLKTNLHRFKSKEIKADDRGRYFD
MMVAAYLINPLVGEYPYDAVAKDYLGLMLSSKKDYLGKLDFTQMMKEDEKKAVDCACYEV
YTAWKSKPVLLQKLKEMNMLTLYRDIELPLVFVLYDMENEGIRADGIKLKEYGDKLAVSI
TELEKKIYEAAGEEFNINSPKQLGVILFEKLGLPNEKKTKTGYSTAADVLEKLAPEYPIV
ADILEYRQLTKLKSTYADGLSGYIASDGKIHTTLNQTITATGRLSSTEPNLQNIPIRIEL
GKLIRKVFLPEEGDLFVDSDYSQIELRVLAALSGDERMIEAFKNGQDIHRSTASLVFDTP
FDEVTDLQRRNAKAVNFGIVYGISAFGLSNDLGISRKEAQGYIDSYFVKYPKIKEFLDQT
VLDAKKNGYTKTMFGRIRPIPELNSSNFMQRQFGERVAMNSPIQGTAADIIKIAMIRVHD
RLLDEGLKSRLILQVHDELLIETKEAEKDKVIKLLEKEMRGAVDMKVSMEVGTECGYDWY
DAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagcttgtacttatagacggacacagtattttaaacagggcatatcacgga
cttcctgatctgaccaattcagaggggcttcacacaaatgcagtctatggatttttgaat
atcatgttcaagattcttgacgaggaaaagcctgactatctgacggtggcatttgatgtg
catgcgccgacgtttcgccacaggatgtttgatgcgtacaagggcacgagaaagcctatg
gacgaggagctcaggcagcaggtgcctatgataaaggaaatgcttaccgctatgggcatt
aaaatcgtggaaaaggagggctatgaggccgacgatatacttggaaccttatctgtcagg
gcagaaaaggccggtatggatgtcgccatcatttccggagacagagaccttttgcagctt
gcgactgaccatgtcatggtaaggattccaaagacaaagaaaacaggaaccgagatagaa
aattacaatacagcagatgttatcgaaaagtacggcgtcactccaaaggagtttatcgat
gtaaaggctctgcagggggatacgtctgataatattcccggggtacccggtatcggcgaa
aagacagcaggtgcacttatagcaaaatatcactgtatagaggcagtacatgaggacgct
gagaatgtaaagccgccaagggcttcaaagaatatagtggagtattgggagcaggcgctt
atgagcaaggagcttgcgacaatcatacttgatgcgccggttgactatgaattttctgat
gcaaagcttagtggcggagtagagtcactctacacggaggaagcctttttactgtgcaaa
agatacgaattcaaaaacatgctgtcgcggtttaacgtggaggctcctaaaaacaatgcc
gaggagcattttgtggtagtaagggacttgaagactgcagagagtgtgtttgagaaggca
aaggacagggaggttgcttttgcggtagtaccaggagagtctttggaaaacagcgaaagt
gatggacagctaagtctgttttcggagccggtttctaacgattatcttgctgtttcgatt
tgtttttcagaggaggacatttattttatctgtacaggtgatgagatttcaagcagcttc
ctggatgaaaaattaaataccctggaagtaaagtcatggatatcaccggatttaaagacc
aatctgcacagatttaagagcaaagagataaaggcagatgacagaggcagatattttgac
atgatggtggctgcataccttatcaatccgcttgtcggggagtatccctatgatgcggtt
gcaaaggactatctggggcttatgctctcatctaaaaaggattatctgggaaagcttgat
tttactcagatgatgaaggaggatgagaaaaaggcagtggactgtgcctgctacgaggtg
tatactgcctggaaatcaaaaccggttcttttgcagaagctaaaagaaatgaatatgctc
actctttacagagatatagagctgccactcgttttcgtactgtatgatatggaaaatgag
gggataagggctgatggaataaagcttaaggagtatggagacaagcttgctgtttcgata
actgagcttgaaaagaaaatatatgaggcagcaggtgaagagtttaatataaattcgcca
aagcaacttggagtcattctctttgaaaagcttggactgccaaatgaaaagaagacaaag
accggttattctactgcggcagatgtgcttgaaaagctggcaccggagtatccgattgtc
gcggatatattggaatacagacagctcacaaagctaaagagcacatatgctgacggactt
tcgggatatattgcatccgatggcaaaatccatactaccttaaatcagacaatcactgcg
acaggccgtctttcaagcacagagcctaatctgcagaatatcccgataaggattgagctg
ggcaagcttatcagaaaggtatttctgcctgaggagggagatttgtttgttgattcagac
tattcgcagatcgagcttcgggtgcttgcggcgctttccggggatgaaaggatgatagag
gcctttaagaatggtcaggatatccacagaagtacagcatcccttgtgtttgacacaccg
tttgatgaggtcacagaccttcaaagacgaaatgccaaggcggtaaattttggtatcgta
tatggtatcagcgcgtttggtctgtctaacgatctggggatttcaaggaaagaggcacag
ggctatatagacagctattttgtcaaatatccaaagattaaggagtttttggatcagacg
gttttggatgccaagaaaaatggctatacaaagaccatgtttgggcgtatcagaccgatt
cccgagctgaactcgagcaatttcatgcaaagacagtttggagagagagttgcgatgaac
tcacctattcagggtacagcagccgatatcataaagattgccatgatacgtgtgcatgac
aggcttcttgacgagggcttaaagtcaagacttatccttcaggtgcatgatgagctttta
attgagacaaaggaagctgagaaggataaagtgattaagcttctggagaaagagatgcgt
ggtgcggtggacatgaaggtatccatggaggtgggcaccgagtgtggctatgactggtat
gatgcgcattga
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