Agathobacter rectalis ATCC 33656: EUBREC_1568
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Entry
EUBREC_1568 CDS
T00909
Name
(GenBank) AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ere
Agathobacter rectalis ATCC 33656
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_1568
Enzymes [BR:
ere01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUBREC_1568
DNA repair and recombination proteins [BR:
ere03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EUBREC_1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACR75312
UniProt:
C4Z990
LinkDB
All DBs
Position
1454354..1457824
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AA seq
1156 aa
AA seq
DB search
MSLQFITGNSGNGKTKYLFNRIVKEAKANPRDNYLVIVPEQFTMQTQRQLVDLSENKAIM
NIDVLSFKRLAYRVFDELGITNLTVLEETGKNLVLRKLAAQEADKLGVIGRNLNRIGYIS
EVKSLLSELVQYNISPEELGRYIASGMLSDTLSDKLKDVLVLYEAFEKFMQDKYITAEEI
LNVLSNVAEESAILRNSVIAFDEFTGFTPIQNQLIKKLFVISKKIYVTLTIDCREDIFKS
RGMQELFDMPKRTVKSLTEMAAFYGIEVEEPIILDKNYRLAENEELSFMEQQLFRKRRSS
FKKAPKHIHIDCLRDPKQELTKIARRINELVRNENLRYRDIAIVTGDVNIYAGYVREIFD
KYNIPYFIDATQEILFHPFIEFIRSIPDIAAQNFSADAVFRFLRCGFTELSASEIDVLEN
YVLACGVRGKSAWDKKWVRLPKHKAGYDIELLNQSREYIMELLKPVYQVFSDKKSTVKDY
VLAIYKLIVLLDIPDKLAKKEQALLDAGDQTASKEYGQIYKIVMQLFEKYVAVLGDECMD
AEEFTQILDAGLDAADVAVIPPGYDTVTIGDIERTRLTNIKVMFFAGVNDGIVPKAAGRG
GIISQYEREALKELDIELAPGAREQAFIQRFYLYLNMTKPSRELYISYTRLDSEKKAAQP
SYLIGILKGMFPELVVTETEDVEQLLDISSRQSALDYLLSNEVDDRWCEIAAAVMFYDAS
VSDAGDGNEVDDKAFTQKNSVERLINARFEHYSKDPISRNVARSIYGRHMEGSITRFEQF
ARCAYAHFLNYGLRLTEREESGFTSLDMGNIYHEALERYSKKLDRESTDWFSVTDAKRDE
LAMEAINEVIDEYAGFGIFDTAESQHSISHMKAVFKQTVWALTTQIRRGSFVPERFEFSF
YESLDMANDVTVDIKGRVDRTDTYTDEDRLFVKVLDYKSGNTVFDLVKLYYGTQLQLAVY
MDAVMEQKKEALKQVSVEPGGMLYYHIDDPVIDLKDVTPGTELSEEEINQMILKKLKPDG
LINSDEKAYRGMDRDFEKSSDVIPVTLKKDQTPAAGSKVANAEEFDVITRFAREKLREIG
REIYDGNVDVNPIKNKKIDSCAYCAFQAICRYDSRIPGFSERSFNGDNKEDVLDKMRTQI
AAAEHEACYGDNNIKP
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacagtttatcacaggtaattcaggaaacggaaaaacaaaatatctctttaac
aggatagtgaaagaggcaaaggcaaacccaagggacaattatcttgtaatagtgcctgag
cagtttacaatgcagacgcagagacagcttgtagatttgtcggagaataaagctatcatg
aatatagatgtgctaagctttaagcgcttagcctacagagtgtttgatgagcttggaatc
acaaatctcacggtgcttgaggagacaggtaagaaccttgtactcagaaagcttgcggca
caggaggcggataagcttggcgtaataggcagaaacttaaaccgcatcggctatataagc
gaggtgaagtcactgctttcggagcttgtgcagtacaatatatcacctgaggagctcgga
agatatattgcctcaggcatgctatcggatacactttcagataagcttaaggatgtgctc
gtgctatacgaagcatttgagaagtttatgcaggacaaatatatcactgcagaggaaata
cttaatgtgcttagcaatgtggcggaggagtctgcaattcttagaaattcagtcattgca
tttgatgaatttaccggatttacacctatacagaaccagctcatcaaaaagctctttgtc
atttcaaagaaaatatatgtaacgctcacaatagactgtcgtgaggatatctttaagagc
agaggcatgcaggagctgtttgacatgccaaaaaggacagtgaaatcactcaccgaaatg
gcagcgttttatggcatagaagtcgaggaacctattatccttgataaaaactaccggctt
gcagaaaacgaagagctaagctttatggaacagcagcttttcagaaaacgaagaagctcc
tttaaaaaagcaccaaagcacattcatatagactgtctgcgtgacccgaagcaggagctg
acaaagatagccagaagaattaatgagcttgtaaggaacgaaaacctgcgttaccgagat
attgctatagtcacaggagatgtgaatatatatgcaggttatgtgcgtgaaatatttgac
aaatacaatattccttactttatcgatgccacacaggagatacttttccatccgtttatt
gagtttatcaggtcaatacccgatattgcggcacaaaatttctcggcagatgcggtgttc
agatttttgcggtgcggctttacggagctttcggccagtgaaatagatgtacttgaaaac
tacgtgctcgcctgtggagtaagaggtaaaagcgcatgggacaaaaagtgggtcaggctg
ccaaagcataaggcaggctatgacattgagcttttaaaccaaagcagggagtatataatg
gagctgctaaagccggtatatcaggtgttttccgataaaaagtcaacggtaaaggactat
gtgctcgctatatataagctgatagttttgcttgatatacctgataagcttgcaaaaaag
gagcaggcactgcttgatgcaggggaccagaccgcatcaaaggaatatggacagatatac
aaaatagtcatgcagctctttgaaaaatatgtggcggtgctgggcgatgaatgcatggat
gcagaggaatttacacagatactggatgcaggactggatgcggcagatgtagcagtcata
ccgccgggatacgacactgtgaccatcggagatattgagagaacgcgtctgaccaacata
aaggtcatgttttttgcaggcgtaaacgatgggattgtgccaaaggcagcaggaagaggc
ggcatcatatcacagtatgagagagaggcacttaaggagctggatatagagcttgcgcct
ggggcaagggagcaggcatttatacagaggttttatctgtatctgaacatgacaaagcca
tccagggagctttatatcagctatacgagacttgacagtgaaaaaaaggctgcccagcca
tcgtacctcataggtatattaaaggggatgtttccggagcttgtcgtgactgagacagag
gatgtagaacagcttttggatatatcaagcaggcagagtgctctggattatctgctgtca
aatgaggtggatgacagatggtgcgagattgcagcagcagtgatgttctatgacgcatca
gtcagtgatgcaggggacggtaatgaagtagacgataaagcatttactcaaaaaaattct
gtggagcggctcatcaatgcaaggtttgagcattattcaaaggatccgattagccgaaat
gtggcaagaagcatatacggcagacacatggagggcagtatcacgcgctttgagcagttt
gccagatgtgcatatgcgcattttttaaattatggattgaggcttacagagcgtgaggag
agcggctttacatctcttgatatgggtaatatataccatgaagcactggaaagatacagt
aagaagcttgatagggagagtactgactggtttagcgtgacagatgcaaaaagggatgag
cttgcgatggaagcaataaatgaggtgattgatgagtatgcaggctttggcatatttgat
acagcggaaagccaacattcgatatcacatatgaaggcggtctttaagcagacagtatgg
gcacttacaacccagatacgaagaggcagctttgtgcctgagaggtttgagttttctttt
tacgagagccttgatatggcaaatgatgtgacggttgatataaagggacgcgtggacagg
actgacacatatacggatgaggacaggctttttgtgaaggtactggattacaagtcggga
aatacagtttttgacctggtgaagctgtactatggcacgcagcttcagcttgcagtgtac
atggacgctgtcatggaacaaaagaaagaggcgctaaagcaggtaagtgtggagccgggc
ggtatgctgtactatcacatcgacgatcctgtaattgatttaaaggatgtgacaccgggc
actgagctgtctgaggaagaaatcaatcagatgatattaaagaagctcaagcctgacggg
cttatcaactcggacgaaaaggcatacagaggcatggacagggactttgagaaaagctct
gacgtaatccctgtcaccttaaaaaaggatcagacaccggctgcaggctcaaaggtggca
aacgccgaagagtttgatgtgataacaaggtttgcgcgagagaagcttcgcgagatagga
agagaaatatacgatggaaatgttgacgtcaatcctatcaagaacaagaaaatagacagc
tgcgcatattgcgcttttcaggccatatgcaggtatgattcaaggataccgggctttagc
gaaagaagctttaacggtgacaataaggaagatgtacttgataaaatgcgtacacagatt
gcagcggcagagcatgaagcatgctatggagataataatataaagccataa
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