Agathobacter rectalis ATCC 33656: EUBREC_2788
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Entry
EUBREC_2788 CDS
T00909
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ere
Agathobacter rectalis ATCC 33656
Pathway
ere03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUBREC_2788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_2788
DNA repair and recombination proteins [BR:
ere03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EUBREC_2788
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EUBREC_2788
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
MscS_porin
UB2H
Microtub_bd
DUF1811
EAD9
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACR76518
UniProt:
C4ZHN1
LinkDB
All DBs
Position
complement(2666796..2668778)
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AA seq
660 aa
AA seq
DB search
MEFKLHSKYKPTGDQPQAIEQLVKGFKEGNQFETLLGVTGSGKTFTMANVIAALNKPTLI
ISHNKTLAGQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPQSDTYIAKDSSVNDEIDKL
RLSATAALTERKDVIVVASVSCIYGLGSPDEWTGMSISLRPGQERDRDDLARALIDLQYT
RNDMDFHRGTFRVHGDVLDIFPANADDTAIRVEFFGDEIDRIVEVDVLTGEVKCSLEHTM
IFPASHYVVSQEKINEACLNIEKELDERVKYFKGEDKLIEAQRIAERTNFDIEMMRETGF
CSGIENYTRHLNFAKPGEPPMTLIDFFPDDFLIIVDESHITIPQIGGMYAGDRSRKTTLV
DYGFRLPSALDNRPLNFEEFEGKIDQMLFVSATPNKYENEHELLRAEQIIRPTGLLDPEI
SVRPVEGQIDDLVSEVNKETANHHKVLITTLTKRMAEDLTNYMAELGIRVKYLHSDIDTL
ERAEIIRDLRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTIGRAA
RNSEGHVIMYADKITDSMRVAIDETKRRRKVQEEYNEAHGITPQTIQKSVRDLIAISKKV
AADENALDKDPESMSKKELEKHIADIEKKMKKAAAELNFEAAAEYRDKLIMLKNTLRDIR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaactgcattcaaaatacaagccgaccggcgaccagccacaggcgatagag
cagcttgtgaagggctttaaggagggcaaccagtttgaaaccttacttggagttacaggc
tccggcaagacctttaccatggccaatgtcattgcagcactcaataagcctacacttatc
atatcgcacaataagacactggcggggcagctctatggtgagatgaaggagtttttccct
gagaatgcagtagagtattttgtttcctactacgactattaccagcctgaggcatatgtg
ccgcagtctgatacgtacatagccaaggattcctctgtaaatgatgagatagataagctc
aggctttcagccacggcagcactcacagagcgaaaggatgtcattgtcgtggcatcggtt
tcctgcatatacggacttggaagtcctgatgagtggacaggcatgagtatttcgctgcgc
ccggggcaagagagggacagggatgatctcgcgagggctctcatagatttacagtacacc
aggaatgatatggattttcaccgaggcaccttcagagtgcatggtgatgtgcttgatata
tttccggcaaatgccgatgatacagcaatcagggttgagtttttcggtgatgagatagat
cggatagtagaggttgatgtgctgaccggcgaggtaaagtgctcgcttgagcacacgatg
attttccctgcatcccactatgtagtttcgcaggagaagataaatgaggcctgcctcaat
atagagaaagagcttgatgagcgtgtgaagtattttaaaggcgaggacaagctcatagag
gctcagcgaatagcagagaggactaattttgacatagagatgatgagggagacaggcttc
tgctcaggaattgagaactatacgaggcatctgaactttgcaaagccgggggagcctcct
atgacactcatagatttcttcccggatgattttctcataatcgtggatgagtcacatatc
acgattccacagataggcggtatgtatgcgggtgaccgctctagaaagaccactcttgtt
gattatggcttcagactgccctcggcccttgacaacagacctctcaattttgaggagttc
gagggtaaaatagaccagatgctctttgtctcagccactcctaataagtatgagaatgag
catgagctgcttcgtgcggagcagattatcagaccgacgggacttttggatcctgagata
tcagtgcgccctgttgagggacagattgatgaccttgtgtcagaggtcaataaggagact
gcaaaccatcacaaggtgcttatcaccacactcacaaagcgtatggctgaggatctcacg
aactatatggcagagcttggcatcagggtaaagtacctgcattcagatatagatacactt
gagagagcggagataatacgtgacctgcgtcttgacgtatttgacgtgctcgtcggcatc
aatctgctcagggagggtcttgatatcccggagattacacttgttgccatactcgatgcg
gataaggaaggtttccttcgctcagagacctcacttatacagacgataggacgtgccgca
cgtaacagtgagggccatgttatcatgtacgctgacaagattacagactccatgcgtgtc
gcaattgacgagacaaagcgtcgtagaaaggtacaggaagagtacaatgaggctcacggc
atcacgccacagactatacagaaatccgtgcgtgatctcatagctatctcaaagaaggta
gcggccgatgagaatgctcttgacaaagatccggagtcaatgagcaaaaaagagcttgag
aagcatattgcagatatagagaaaaagatgaaaaaagcagcggcagagctcaatttcgag
gctgctgcagagtacagggataagcttattatgctgaaaaacacactgagagatatacga
taa
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integrated database retrieval system
