Agathobacter rectalis ATCC 33656: EUBREC_2913
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Entry
EUBREC_2913 CDS
T00909
Name
(GenBank) HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ere
Agathobacter rectalis ATCC 33656
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ere03019
]
EUBREC_2913
Messenger RNA biogenesis [BR:
ere03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EUBREC_2913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACR76642
UniProt:
C4ZI05
LinkDB
All DBs
Position
complement(2791274..2792218)
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AA seq
314 aa
AA seq
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MKYISTLREGERINEIFLCKSKQTAMTKSGKPYDNVILQDKTGTLDAKIWDVGSVGIEEF
DAMDYIAITGDITSFQGNLQCSIKRARKVNEGEYDPADYLPVSDKDVEVMYKELMGFIGS
VKNQYLSQLLHSFFDNKEFERRFKFHSAAKSVHHGFVGGLLEHTLGVTKNCDYFAKMYPV
LNRDLLLTAAIFHDIGKLKELSTFPENDYTDAGQLLGHIMIGAEWVGDAIKSIDGFPVVL
ANELKHCILAHHGELEFGSPKKPALVEALALSFADNIDAKMETFRELLVNVPENDTKWQG
YNRFMETNFRRTSV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatatttcaactctccgcgagggagagagaatcaatgagatttttttatgcaag
agcaagcagacagccatgaccaaaagcggaaagccttatgacaatgttatcctgcaggat
aagacaggtacgctggatgccaagatatgggatgtgggctcagtaggcattgaggaattt
gatgcaatggattacatagccataaccggtgatatcacaagctttcagggcaatttgcag
tgttccataaagcgtgcgagaaaggtaaacgagggagaatatgaccctgcggattatctg
ccggtcagcgataaggatgtcgaggtcatgtataaggaactcatgggctttatcggttct
gtaaagaatcagtacctgtcacagctcttacatagcttttttgacaataaggagtttgag
cgccgtttcaagttccattcagcagcaaagagcgtgcaccacggctttgtaggaggtctt
ttggagcatacactcggtgtgacgaagaactgtgattattttgcaaaaatgtatccggtt
ttaaaccgtgacctgcttcttacagcagctattttccatgatatcggaaaattaaaggag
ctttctactttcccggaaaatgactatacagacgctggtcagctcctcggacatatcatg
atcggtgcagagtgggtaggcgatgcgattaagagcatcgacggcttcccggtagtgctc
gcaaacgagctgaagcactgtatacttgcccaccacggcgagcttgagtttggctctccg
aaaaagccggcacttgtcgaggcacttgcacttagctttgcagacaacatagatgccaag
atggagaccttcagggagctgcttgtaaatgtgcctgaaaacgatacaaagtggcagggc
tacaacagatttatggagacaaatttccgcagaacaagtgtgtaa
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