Erythrobacter sp. THAF29: FIU90_05070
Help
Entry
FIU90_05070 CDS
T06318
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
erf
Erythrobacter sp. THAF29
Brite
KEGG Orthology (KO) [BR:
erf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erf03009
]
FIU90_05070 (rimO)
Enzymes [BR:
erf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FIU90_05070 (rimO)
Ribosome biogenesis [BR:
erf03009
]
Prokaryotic type
ribosomal protein modification factors
FIU90_05070 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QFT76906
LinkDB
All DBs
Position
complement(1021752..1023131)
Genome browser
AA seq
459 aa
AA seq
DB search
MNTPTTSLPDQKRVGMVSLGCPKALVDSERILTRLRADGYAMSPDYAGADVVLVNTCGFL
DSAKEESLAAIGEAISENGRVIVTGCMGEEADAIRAAHPQVLAVTGAHQYEQVVEAVHEH
APPSQGPFVDLIPQPDIKLTPRHYSYLKISEGCNHSCSFCIIPQLRGKLASRRIDAVLRE
AEKLVAAGTRELLVISQDTSAYGVDTRHEAKPWKGREVRAHMTDLARELGQLRTEGGSAP
WVRLHYVYPYPHVDKVIPLMAEGLLTPYLDIPFQHAAPSVLKAMKRPANEAKVLERLKGW
REVCPDIAVRSSFVVGFPGETEDDFKYLLDWLEEAQLDRVGAFRFEPVEGAAANDLPNPV
PEEVKEERYARLMEVTERISAAKLTAKVGKTLPVIIDEVGEPDEDGDIGATGRSQADAPE
IDGAVHLRNVPDSLEAGDIVDVTIEDADAHDLFGVMERN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaataccccgaccacttccctccccgaccaaaagcgcgtcggcatggtttcgctcggc
tgtccgaaggcgctggtcgattccgaacgcatcctcacccgtctgcgcgccgatggctat
gcgatgagccccgattacgccggtgccgatgtcgtgctggtcaatacatgcggcttcctc
gacagcgccaaggaagaaagccttgccgcaatcggggaggcgatcagcgagaatggccgc
gtgatcgtgaccgggtgcatgggcgaagaggccgacgcgatccgtgccgcgcatccgcaa
gtgctcgcggtgaccggcgcgcatcagtacgagcaagtggttgaagcggtgcacgagcac
gcgccgccctcgcaagggccgtttgtcgacctgatcccgcagccggacatcaagctgacc
ccgcgccactacagctatctcaagatttccgaaggctgcaatcactcctgttccttctgc
atcatcccgcaattgcgcggaaagctggcgagccgccggatcgacgcggtgctgcgcgag
gcggaaaaactcgttgcggccggcaccagggaattgctcgtcatcagtcaggacacctcg
gcctacggggtcgatacgcgccacgaagccaagccctggaaaggacgcgaggttcgcgcg
cacatgaccgaccttgcccgcgaactcggccagttgcgaaccgagggcggcagcgctccg
tgggtacgcctgcactacgtctacccctatccgcacgtcgacaaggtcatcccgctgatg
gccgaggggctactcaccccctatctcgacatcccgttccagcacgccgcgccttcggtg
ctcaaggcgatgaagcgtcccgccaacgaggccaaggtattggagcgcctcaagggctgg
cgcgaggtctgccccgacatcgcggtgcggtcttccttcgtcgtcggctttcccggcgag
accgaggacgatttcaaatacctcctcgactggctcgaggaagcgcaattggaccgcgtc
ggtgccttccgcttcgaacccgtagaaggcgctgcggcgaacgatcttccaaaccccgtt
cccgaagaggtcaaggaagagcgatacgcccgcctcatggaagtcaccgagcggatctcc
gccgccaagctcaccgccaaagtcggaaaaacgctccccgtcatcatcgacgaggttggc
gagcccgacgaagacggagatatcggtgcgaccgggcgctcacaggccgatgccccggag
atcgatggtgccgtccaccttcgcaatgtccccgattcgcttgaggccggagacatcgtc
gatgtcacgatcgaggatgcagatgcgcacgacctgttcggagtgatggagcgaaactga
DBGET
integrated database retrieval system
