Erythrobacter sp. THAF29: FIU90_08785
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Entry
FIU90_08785 CDS
T06318
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
erf
Erythrobacter sp. THAF29
Brite
KEGG Orthology (KO) [BR:
erf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FIU90_08785 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erf03019
]
FIU90_08785 (rnc)
03009 Ribosome biogenesis [BR:
erf03009
]
FIU90_08785 (rnc)
03036 Chromosome and associated proteins [BR:
erf03036
]
FIU90_08785 (rnc)
Enzymes [BR:
erf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FIU90_08785 (rnc)
Messenger RNA biogenesis [BR:
erf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FIU90_08785 (rnc)
Ribosome biogenesis [BR:
erf03009
]
Eukaryotic type
90S particles
RNase
FIU90_08785 (rnc)
Prokaryotic type
rRNA processing factors
FIU90_08785 (rnc)
Chromosome and associated proteins [BR:
erf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FIU90_08785 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QFT77633
LinkDB
All DBs
Position
complement(1804815..1805504)
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AA seq
229 aa
AA seq
DB search
MSSLPEETREWLERTGFTVSDPKLWLEALTHGSFNGGAANTAEADYQRLEFLGDRVLGLS
VASWLYNAHEAPEGRLSQRLNALVSGSTCARIARSIGLPEHIRLGKQAREDGGADSDNIL
GDVMEALIGASFVENGYDKTRDCVYRLWEAELVGDSGKAKHPKSALQEWAAGNRRAMPKY
EVVERTGPDHAARFTVRVSVHNVGEAEGVASSKGEAEKRAAQAFLEEYG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcttcccgaagagacccgcgaatggctagagcgcacaggcttcacggtcagc
gaccccaagctgtggcttgaagcgctcacccacggaagcttcaacggcggcgctgccaac
acggccgaggccgactaccagcggctcgaattcctgggcgaccgtgtgctcggcctgtcg
gtcgcaagctggctctacaatgcgcacgaggcgccggaaggccgcctctcgcagcgcctg
aacgcgctggtgagcggctcgacctgcgcgcgcattgcgcgctcgatcggccttcccgaa
cacatccgcctcggcaagcaggcgcgagaggatggaggggccgatagcgacaacatcctc
ggcgatgtgatggaagcgctcatcggcgccagcttcgtcgagaacggttacgacaagacg
cgcgattgcgtctaccggctctgggaagctgagctcgtcggcgattccggcaaggcgaaa
catcccaaaagcgcgctccaggaatgggctgcgggcaatcgccgggcgatgcctaaatac
gaagtcgtcgagcgtaccggcccggaccacgcagcgcggtttacggttcgggtgagcgtc
cacaatgtcggagaggcagagggcgttgccagcagcaaaggcgaagcggaaaaacgcgcc
gcgcaggcattcttggaggaatacggttga
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