Erythrobacter sp. THAF29: FIU90_12260
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Entry
FIU90_12260 CDS
T06318
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
erf
Erythrobacter sp. THAF29
Brite
KEGG Orthology (KO) [BR:
erf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erf03032
]
FIU90_12260
03400 DNA repair and recombination proteins [BR:
erf03400
]
FIU90_12260
Enzymes [BR:
erf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIU90_12260
DNA replication proteins [BR:
erf03032
]
Prokaryotic type
DNA Topoisomerases
FIU90_12260
DNA repair and recombination proteins [BR:
erf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU90_12260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QFT78315
UniProt:
A0A5P9GUD5
LinkDB
All DBs
Position
complement(2507143..2508153)
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AA seq
336 aa
AA seq
DB search
MEKLIYVDDSLPGITRRGAGRGFAYYSPEGELIRCRKERARLNGIALPPAYRDAWFCPMN
NGHILATGFDERERKQYRYHPEFRLMRESEKFDRCLEFGKMLPKIRKRVEADIDGDNATR
SRVLAAVVRLLDMGFVRIGNEIYKKSNNSFGASTLRDQHATIHGSTVELCYVGKGGKERH
ITLEDEALARAVEDARDVPGDHLFQYYDEDGQRQPIGSGDVNEYLREVMGDEFSAKNFRT
WHASVLAFSVIARARTRPTISSMLEEVSDKLGNTPVVARNSYIHPAVIDILSRDSGWEVW
RENLRMPRATRYLTRHERGLIQLLEESPEAAELLAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcttatctatgtcgatgacagcctgccgggcatcacgcggcgcggtgcgggg
cggggctttgcctattactcgcccgaaggcgaactgatccgctgccgcaaggaacgtgcg
cggctgaacggtattgcgctgcctccagcctatcgcgacgcctggttctgcccgatgaat
aacggccatatactcgccaccggttttgacgaacgcgagcgcaagcaatatcgctaccac
cccgaattccggctgatgcgcgagagcgagaaattcgatcgctgccttgaattcggcaaa
atgcttccgaagatccgcaaaagggtggaagccgacattgatggcgacaatgcgacgcga
tcgcgcgttctggctgccgttgtccgcttgctcgacatgggtttcgttcggatcgggaac
gaaatctacaagaagagcaacaattccttcggagcctccacgctgcgcgatcagcatgcg
acaatccacggcagcactgtcgagctctgctacgtcggcaagggcggaaaggagcggcat
attacgcttgaggatgaagctctggcgcgggcggtggaggatgcgcgagacgtgccggga
gatcatctcttccagtactacgatgaggacgggcaacgacagccaatcggcagcggggac
gtgaacgaatatctgcgcgaggtcatgggagacgagttttcggcgaaaaacttccgcacg
tggcatgcgagcgtgctcgcattttcggtgatcgctcgggccagaacgcgccccactatc
agctcgatgctggaggaggtttcggacaaacttggcaacacacctgtggtcgcacgcaac
agctatattcaccccgccgtgatcgacatcctttcgcgcgatagcggctgggaagtatgg
cgcgaaaacctccggatgccgcgcgccacccgttatcttacccggcacgaacgagggttg
atccaactgctcgaagaaagcccggaggccgcagaattgcttgctgcctag
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