Ehrlichia ruminantium Gardel: ERGA_CDS_02380
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Entry
ERGA_CDS_02380 CDS
T00232
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
erg
Ehrlichia ruminantium Gardel
Pathway
erg03420
Nucleotide excision repair
erg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
erg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERGA_CDS_02380 (uvrD)
03430 Mismatch repair
ERGA_CDS_02380 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erg03400
]
ERGA_CDS_02380 (uvrD)
Enzymes [BR:
erg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERGA_CDS_02380 (uvrD)
DNA repair and recombination proteins [BR:
erg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERGA_CDS_02380 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ERGA_CDS_02380 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ResIII
DUF1195
Motif
Other DBs
NCBI-ProteinID:
CAI27690
LinkDB
All DBs
Position
complement(385826..387745)
Genome browser
AA seq
639 aa
AA seq
DB search
MEDYITSLNEDQKKAVTNINGPILILAGAGTGKTRTITSRIAYILNNNFALPNQILAVTF
TNKAANEMLSRINELTCASNIWLGTFHAIATKILRQHAEAVGLKSDFTIIGTDDQLQVIK
TIVNDMHPEYASDAYKIILNKIQRWKDRGLVPTNISDTELNKPINTIALSTYNIYQERLK
FLNCADFGDLLLYNIEIFTKQHNILSHYQEQFKYIMVDEYQDINTIQYLWLRLLAQKHKN
LCCVGDDDQSIYSWRGAEVGNILKFSDDFPNAKTIRLECNYRSTSNILEVATAIINNNKS
RLGKKLWTTNQEGNKVNLMKFWDSRIEAQYICEYIKNLHDYQFKETAILVRAGFQTRIFE
EYFIKYNIPYRIIGSTRFYDRQEIRDIIAYLKITVNPQHDIAFDRIINKPKRNVGASTLN
KIYSYAKQYNTHFLDATKILIENNQLSEKTSRSLNNLLNKINSWKESLLSDSISNTVKMI
AYDSGYIDMLENEGESGLARIENIKELFSALLNFNDVNAFLEHISLVTEVDISNDDDNYT
CIMTLHAAKGLEFPVVFLPGWEEGVFPHEKSLQDRTGEALEEERRLAYVGITRAREQLFI
SCVAVRDINNWRQQMEISRFIKELPIEHIQVIKNISNYH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaagattacattacttcactaaatgaagatcagaagaaagccgttactaatattaat
ggacctattttaatattagctggagcaggaacaggtaaaaccagaactattacatcaaga
atagcatatattcttaataacaattttgcacttcctaatcaaattttagctgtcacattt
actaacaaagctgctaatgaaatgctttcaagaatcaatgaattaacctgtgcatcaaac
atatggctgggtacgtttcatgcaatagcaacaaaaatccttcgacaacatgctgaagca
gtaggcttaaaaagtgattttaccatcattggcacagatgatcaattgcaagtaatcaag
actatagttaatgacatgcatcctgaatatgcatcagatgcttataaaattattttaaac
aaaatacaaagatggaaagatagaggattagtacctacaaatataagtgatacagaatta
aataaacccatcaatacaatagcattaagtacctataacatttatcaagaacgactaaag
tttcttaactgtgctgattttggggatttactattatataacatcgaaatatttaccaaa
cagcataatattttatcacattatcaagaacagtttaaatacatcatggttgatgaatat
caagatatcaacacgattcaatatttatggttgagattactagcacaaaaacataagaac
ttatgttgtgttggagatgatgatcaatcaatatatagttggcgtggggcagaagtagga
aatatattaaaattctcagatgatttccctaatgcaaaaactatacgtctagaatgcaat
tatagatcaacatcaaatatactagaagttgctacggcaataataaataataataagtct
aggttaggaaaaaaattatggacaacaaatcaagaaggaaacaaagttaatttgatgaag
ttttgggatagtagaatagaagcacaatatatatgcgaatatataaagaatttacacgat
tatcaatttaaagaaacagctattttagtaagagcaggatttcaaactagaatatttgaa
gaatattttattaagtacaatataccatatagaataattggaagtacaagattttatgat
cggcaagaaattcgagatattattgcatacttaaaaattactgtaaatcctcagcatgac
attgcttttgatagaatcattaataaacccaaacgaaatgttggagcatccactttaaat
aaaatatactcatatgcaaagcagtataatacccactttttagatgctacaaaaatatta
attgaaaataatcagctctcagaaaaaacatcaagatcattaaataacctgctaaacaag
atcaattcttggaaggaatccttattatcagattcaatatcaaatactgtgaagatgata
gcatatgattcaggatacatagatatgctagagaatgaaggagaaagtggattagcacgt
atagaaaacataaaagaattattctctgcattactaaatttcaatgatgtaaatgcattt
ttagaacatattagtcttgtaacagaagtggatatatcaaatgatgatgacaattatacg
tgtataatgacattacatgcagcaaaaggcctagaatttcctgtggtttttttaccagga
tgggaagaaggagtttttccacatgaaaaatctttacaagatagaacaggagaagctttg
gaagaagaaagaagattagcatatgttggaattacaagagcaagagaacagttattcata
tcatgtgtagcggtaagagacataaacaattggcgtcaacaaatggaaatatcacgtttt
ataaaagaattacctatagaacatatacaggttataaaaaatatatcaaattaccactaa
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