Ehrlichia ruminantium Gardel: ERGA_CDS_03430
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Entry
ERGA_CDS_03430 CDS
T00232
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
erg
Ehrlichia ruminantium Gardel
Brite
KEGG Orthology (KO) [BR:
erg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erg03032
]
ERGA_CDS_03430 (topA)
03400 DNA repair and recombination proteins [BR:
erg03400
]
ERGA_CDS_03430 (topA)
Enzymes [BR:
erg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ERGA_CDS_03430 (topA)
DNA replication proteins [BR:
erg03032
]
Prokaryotic type
DNA Topoisomerases
ERGA_CDS_03430 (topA)
DNA repair and recombination proteins [BR:
erg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ERGA_CDS_03430 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CAI27795
LinkDB
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Position
566604..569063
Genome browser
AA seq
819 aa
AA seq
DB search
MSLIIVESPSKAKTIGKYLGSKYKVVASFGHIRDFPAKSGSVDPDKDFAMTYEIIAKSEK
YVSKLVQVANKETKEIYLATDPDREGEAIAWHIVEVLREKNAINNNIVINRMVFNEITKN
AILASVKNPRNINMDLVYAQQARRALDYLVGFTLSPLLWRKLPGSKSAGRVQSVALRLIC
DRENEIEKFITQEYWDIEAKLQNVEGREFSAYLKCYSGNKLEKFDIKNEEDANRLSAEIR
QRSYSVSSVEKKHTKRNPYPPFITSSLQQEASTKLGFSAKSTMLIAQKLYEGVDIGGEIV
GLITYMRTDGVYISDEAVEHIRSVISSMFGKEYLPESPRKYVKKIKNAQEAHEAIRPTNI
TITPDSLVSYLTQEQLKLYDLIWKRTVASQMNSAVLDQVIVELSSLDGIVILRALGSSLS
FDGFYKVYGHDDDSKNSILPLLNENDHCPLNDVIPNQHFTNPPARYSEASLVKKMEEIGI
GRPSTYASIISVLQDRQYVVLNQKRFFPTERGRVVNIFLVNFFNRYVEYDFTADLEEKLD
LISNGKIGWKEVLHQFWFLFIDNVNSVKKLEFTQILNAISSEMESHIFPSDVSEVDKMCP
VCNVGTLSLNISKNGVFLGCSQYPECKYTKNIGDSTVDNTEVSQYPRVLGSDAASGEDIY
LKKGPYGIYLQIGGGKDGKRATLPKDIDLNLLDLEMAKKILSLPISLGMYPDTNSEIKLG
LGKFGAYIFYEGKYFSIKKFEGNFLDITLENAIAIIQKNRTNGVIKSLGMSQDNKEVFLC
KGRYGFYLKYDKLNIAIKKGIDVEQMSLVDALKLISEKL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgattatagtggaatctccgtctaaggcaaagactataggtaaatatttaggt
agtaagtataaggttgtggcatcatttggacatatcagggattttcctgcaaaaagtggt
tctgttgatcctgataaagattttgctatgacttatgaaattattgctaaatcagaaaaa
tatgtaagcaaattagtacaagtagctaataaggaaacaaaagaaatctaccttgcgact
gatccggatcgtgaaggtgaggcaatagcatggcatattgtagaagtgttaagggaaaaa
aatgccattaataataatattgtaatcaatagaatggtctttaatgaaattacaaagaat
gcaattcttgcatctgtaaagaatccaagaaatatcaatatggatcttgtatatgcacag
caagcacgtagggctttagattatttagttggttttactttatctcctttattatggaga
aaacttcctgggagtaaatctgctggtagagtacaatctgttgctttgagattgatctgt
gatagggaaaatgaaattgaaaaatttattactcaggaatattgggatattgaagctaag
cttcaaaatgtagaaggaagagagttttctgcatatttaaagtgttattctggtaataaa
cttgaaaaatttgatatcaagaatgaggaagatgctaatagattatcagcagagattaga
cagcgtagttattctgttagtagtgttgaaaaaaaacacacaaaacgtaatccatatccc
ccatttattacgtcgagtttacaacaagaagcatcaactaaacttggattttcagcaaaa
agtactatgttaattgcacaaaagctttatgaaggtgttgatattggaggggaaattgtt
ggattaattacttatatgagaacagatggtgtgtatatttcagatgaagcagtagaacat
attagaagtgttatatcatctatgtttggtaaggaatatttacccgagtctcctcgtaaa
tatgtgaaaaagatcaaaaatgctcaggaagcacatgaagctataagacctactaatatt
acaattactcctgatagtttggttagttatttaacacaagaacaattaaagctttatgac
cttatttggaagcgaacagttgctagtcaaatgaattctgctgtattagaccaggtgatt
gtggaattaagttctttagatggaatagtaattttacgtgcacttggatcttctttatct
tttgatgggttttataaagtatatggtcatgatgatgatagtaagaatagtatactaccg
ttacttaatgagaatgatcattgtcctttaaatgatgttatacccaatcaacattttact
aatcctcctgcgaggtatagtgaggcgagtttagtaaagaaaatggaagaaataggaata
ggtaggccttctacttatgcttctattatttctgtactacaagatcggcaatatgttgta
ttaaaccagaagagattttttcctactgaaaggggaagagttgtaaatatatttcttgtt
aatttttttaatcgttatgtagaatatgattttacggcagatcttgaagaaaagcttgat
cttatttctaatgggaagattggttggaaagaagtattacatcaattttggtttttgttt
attgataatgttaattcagtaaaaaaattagagtttactcagatattaaatgctataagt
tctgagatggaaagtcatatttttccttctgatgtttctgaagttgataaaatgtgtcct
gtatgtaatgttggcacgctgagtttgaacattagtaaaaatggggtatttttaggatgt
tctcaatatccagaatgtaagtatacaaaaaacataggagatagtactgtagataatact
gaagtttctcagtatcctagagtgttaggtagtgatgctgcaagtggagaagatatatat
ctaaaaaagggtccatatggtatttacttacagattggtggtggtaaagatggtaagcgt
gctacacttccaaaagatatagatctcaacctattggatttagaaatggcaaaaaaaata
ttgagtttgccaataagtttaggtatgtatcctgatactaatagtgaaattaaattagga
cttggtaaatttggagcatatatattctatgaaggtaagtatttttcaatcaaaaaattt
gaaggtaactttttagatattactcttgaaaatgctattgctattattcaaaagaatcgt
actaacggagttattaaatctttaggtatgagtcaggataataaagaagtgtttttgtgt
aaaggcaggtatggtttttacttaaagtatgataagttgaatattgctatcaaaaaaggt
attgatgttgaacaaatgtctttagttgatgctctgaaattaatatcggaaaagttatga
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