Ehrlichia ruminantium Gardel: ERGA_CDS_04040
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Entry
ERGA_CDS_04040 CDS
T00232
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
erg
Ehrlichia ruminantium Gardel
Brite
KEGG Orthology (KO) [BR:
erg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erg03021
]
ERGA_CDS_04040 (rpoH)
Transcription machinery [BR:
erg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ERGA_CDS_04040 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UBA_HYPK
HTH_6
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CAI27856
LinkDB
All DBs
Position
complement(666015..666974)
Genome browser
AA seq
319 aa
AA seq
DB search
MKIYYTSFILVVIIIVLYRVIFFIMLTSSILSLTQDNLMSYINEVQSFQVLSLEEEEKLA
KNWYEHGVIADAHKLVTSHLRLVVKVALSFKNYGLPLIELIMEGNIGLMQAVKKFNPNLG
FRLSTYAIWWIKASIKDYILKSWSCIKIGTTQAQRKLFFSLRKIKKKLLKYHNNITKEDI
KMIANECSTSEQEVEQMNKYFTYRDKSLNDVVFSNGSQNGVQLQDMIKCEDPNQEDAYLL
NEETDIKKSLITQALATLNERHRDIFIRRKLIEEPDTLEILSKKYNISKERIRQIETHAF
LKVKNFVISKRKEFGFHNI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatttactatacatcatttatattagtggtaataattatagtgctatacagggtt
atatttttcattatgttaacaagttctatattatctctaactcaagacaacttaatgtct
tatattaacgaagtacaatcgtttcaggttctgtccttagaagaagaagaaaagttagca
aaaaattggtatgagcacggtgttattgctgatgcccataaattagttactagccattta
agattagtagtaaaagttgccttaagttttaaaaattatgggctaccacttatagaacta
atcatggaaggaaatatagggttaatgcaagctgttaaaaagtttaaccctaatttaggt
tttagactctctacatatgcaatatggtggattaaagcttcaataaaagattatatatta
aagtcatggtcatgcataaaaattggaacaacacaagcacaaagaaagttattctttagt
ttaagaaaaattaaaaaaaagctccttaagtaccataacaatatcacaaaagaagatatt
aaaatgatagcaaatgaatgttcaacctctgaacaagaagttgaacaaatgaacaagtat
tttacctatagagataaatcactaaatgatgtagtattctctaatggaagccagaatggt
gtacagctacaagatatgataaaatgcgaagatcctaatcaagaagatgcatacttatta
aatgaagaaacggatattaagaaatctttaattacgcaagcattagcaactttaaacgaa
agacaccgtgatatatttattagaagaaaattaatagaagaaccagatactctagaaata
ctaagtaaaaagtataatatctcaaaagaacgtattagacaaatagaaacacatgctttc
ttaaaagtaaaaaactttgttatatctaaaagaaaagaatttggatttcataatatataa
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