Ehrlichia ruminantium Gardel: ERGA_CDS_06470
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Entry
ERGA_CDS_06470 CDS
T00232
Symbol
recB
Name
(GenBank) Putative Exodeoxyribonuclease V beta chain
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
erg
Ehrlichia ruminantium Gardel
Brite
KEGG Orthology (KO) [BR:
erg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erg03400
]
ERGA_CDS_06470 (recB)
Enzymes [BR:
erg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERGA_CDS_06470 (recB)
DNA repair and recombination proteins [BR:
erg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ERGA_CDS_06470 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
NPHP3_N
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CAI28099
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All DBs
Position
1013468..1016041
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AA seq
857 aa
AA seq
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MRNITTNTFDSLIWISASAGTGKTRILVNRVLKLLITGHQNILCLTFTNAAAYEMTERIH
STLSAWTTLTDTELKTDLQEIIHSNITAQELHQARRLFNSIHNISLSIKTIHSFCYQLIS
AFPIEAGISPNCIVKDLSESFPKIFYKTLNDVTIKHNISAISSEITEKTLYDLLYKLLSN
QDYNPNQELIYHKLNCNITQIKKLPNINQSNLIFLIKALSKGSTRDQKISNKLTAWMNLS
EKYKIAKLNEYTKIFINSTSLEKKSISSIITKKTLNDFPQIEKIIIDIQEEVLEFTNTFY
ANKIAERTVHLTEITKCFTKLYQQNKQRLNYLDHDDVINLALKLLINPHYKDWILFHLDS
KIDHVLVDESQDNSIKQWQIISELCQDFFTGIGTTEETKTLFIVGDIKQSIYSFQNARPD
YFKPMCNYFAQKSNQYKILYLKQSFRSTAPILKLVDKIFNNFRQEISFTTEAIHHEIFRK
HDPGYLEIWPIFHTENNKYNFLENIDHKITPDTNLLLASTIANKIHTWIKNQRILPAKQR
TISAGDILILVRHRTSFIDHMITELKKLNIPTLERDKFKVMDSIIIQDLVNLGEFLLLPE
NDLALAGLLKSPIFEFTEEQIFNLAYNRNNLHLWEVLQLKFSYISDYLKQLINISQTHNP
LDTYNYIISQHKHKFIKRLGQSNIEEIIGEFINLLIKFELDHINSLQAFIHWIKNTNPEI
KSDINHTKNYIKIMTIHNAKGMQSPIVFLTDTTTIPKSDLQLIFDTENTPFWCRNDTHDF
CEKLKTQQKINEYNEYLRLLYVAMTRAEDELYITGTPPIQSKSWYNIIYSISGTYKKKYI
DLQPLTKEKAEVLYLDE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattacaaccaatacgtttgactctttgatatggatatcagcatcagctgga
actggaaaaaccaggatattagtcaatagagtactaaaattattaatcacaggtcatcaa
aatatactttgtctcacatttacaaatgcagctgcatatgaaatgacagaacgtatacat
tcaaccttaagtgcttggacaacattaacagatacagagcttaaaacagacctacaagaa
attattcacagtaatataacagctcaagaattacatcaagcaagaagactatttaacagt
atacataacatatcactttcaataaaaactatacatagtttttgctaccaactaatttcc
gcatttcctatagaagctggaatctctccaaattgtatagtgaaagatttatcagaatcc
tttccaaaaattttttataaaacactaaatgatgtaacaataaaacataacatatctgct
atctcctctgagatcacagaaaaaacactctacgatttattatacaaattactaagtaac
caagactataatccaaaccaagagttaatatatcataaactaaactgtaatataacacag
ataaaaaaattgcccaatattaaccaaagtaatttaatatttcttataaaagctttaagt
aaaggaagtacaagagatcaaaaaatcagcaataaattaactgcatggatgaatttatct
gaaaagtataaaatagcaaaattaaatgaatatacaaaaatatttatcaactcaacatct
ttagaaaaaaaatctatatcatcaataataacaaaaaaaactttaaatgacttccctcaa
atagaaaaaataattatagatatacaagaagaagtattagagtttaccaacactttttat
gctaataaaatagcagaacgaactgtacatttaactgaaatcacaaaatgcttcacaaaa
ctataccagcagaataaacaaagattaaactacttagatcatgatgatgtaattaactta
gcactaaaactacttataaatccacactataaggattggatactctttcatctagatagt
aaaatagatcacgtattagtcgatgaatcacaagacaatagcataaaacaatggcagatc
atttctgaattatgtcaagatttctttacaggtattggaacaacagaagaaacaaaaaca
ttattcattgtaggagatataaaacaatcaatatatagctttcaaaatgctagaccagac
tactttaaacccatgtgcaactacttcgcacaaaaaagcaatcaatacaaaatactatat
cttaaacaatcattcagatctacagcacccattttaaagttagtggacaaaatatttaat
aattttcgacaagaaatatcttttaccacagaagcaatacatcatgaaatttttcgaaaa
catgacccaggatatttagaaatatggcctatatttcatactgaaaacaataagtataat
tttttagaaaatatagatcataaaatcacccctgatacaaatctattacttgcatcaact
attgctaataaaattcacacatggataaaaaatcaaagaattctaccagcaaaacagcgc
accataagtgccggagacatcttaatattggtacgacaccgtacatcttttatagaccat
atgattacagagctaaaaaaacttaacattccaacactagaacgagataaatttaaagtt
atggatagtataataattcaagatcttgtcaatttaggagaatttcttttattaccagaa
aatgatttagcattagcaggattattaaaatcaccaatatttgaattcactgaagaacaa
atattcaacctagcatacaatagaaacaatttacatttatgggaagtattacaattaaaa
tttagttacatatcagactacctgaaacaactaattaatatatcacaaactcataaccca
ttagatacatataattatattatatcacagcataaacataaatttataaaacgtttaggt
caatccaacatagaggagatcataggagaatttattaatctattaataaaattcgagcta
gatcatattaactcattacaagcattcatacattggataaaaaatactaatccagaaata
aaaagtgacatcaatcacacaaaaaattacattaaaatcatgacaatacacaatgcaaaa
ggaatgcaatcacctatagtattccttactgatactacaactatcccaaaaagtgatctt
caattaatattcgatacagaaaatacaccattctggtgccgtaacgatactcatgacttc
tgtgaaaaattaaaaacccaacaaaaaattaatgaatataacgaatatttaagattacta
tatgtagcaatgactagagctgaagatgaattatatataactggtacaccaccaatacaa
agtaaatcatggtacaatataatatacagtatcagtggtacatataaaaaaaaatacatt
gacctacaacctttaacaaaagaaaaagcagaagtattatatttagatgaataa
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