Erysipelothrix rhusiopathiae Fujisawa: ERH_0516
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Entry
ERH_0516 CDS
T01525
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
erh
Erysipelothrix rhusiopathiae Fujisawa
Brite
KEGG Orthology (KO) [BR:
erh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erh03032
]
ERH_0516 (topA)
03400 DNA repair and recombination proteins [BR:
erh03400
]
ERH_0516 (topA)
Enzymes [BR:
erh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ERH_0516 (topA)
DNA replication proteins [BR:
erh03032
]
Prokaryotic type
DNA Topoisomerases
ERH_0516 (topA)
DNA repair and recombination proteins [BR:
erh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ERH_0516 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
ADK_lid
DUF5795
Auto_anti-p27
DNA_ligase_ZBD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAK31573
LinkDB
All DBs
Position
558783..560837
Genome browser
AA seq
684 aa
AA seq
DB search
MKNLVIVESPSKSKTIEKYLGEDFEVVSSKGHIRDLATTGKGGLGVDFDNDFEATYKISK
DKKDVVKELKAKAKKADAVYLATDPDREGEAISWHLANELGVDLDQDNRVVFNEITKDAV
LSAFESPRHIDMNLVKSQETRRILDRIIGFKLSKLLQAKIKSKSAGRVQSVALKLIVDRE
KEIDAFTPEEYWSVLAFFENEGNIIETSAERFKGKKLKLTNEAEAQAVLDAAQGSFNITK
LEKKKRKKESKLPFITSTLQQEASTRLGFPAKKTMRVAQKLYEGIQMGADTEGLITYMRT
DSTRLSNVFVEDAKAFIVEEYGKEYLGKYRQGKKTENTQDAHEAIRPTSISRRPEEVKSY
LTPDEYKLYRFIYYRTLASLMAPSISDSVSVVFSQNDYDFNGSGSIMTFDGYLKVYEYEK
TTDKVMGELDETKAYNAQKIEKNQHFTQPPARYTEARLIKELEELGIGRPSTYSMILETI
VYRAYATFGAVSETSKTKVFKPTDQGILTNEKLQEHFSDIINVHYTANMEDELDRIAEGE
ENNVEALQRFVDKFYPLLEEADEKMEKIEVEKVGEVCPDCGGELVYRFGRYGKFIACGNF
PECRYNRALDQDKRPEPEKTGEVCPDCGEPLVKRKSRYGTFFVGCSGFPKCRYIQPNENA
KKPKTKKPEEVSAEHEPLGEEIKD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttagtaattgtggagtcaccttcaaaatctaaaacaattgagaagtatctt
ggtgaggattttgaagttgtttcttcaaaaggtcatattcgagatttagcgacgactggt
aaaggtggtctcggtgtagacttcgataatgactttgaagcaacatataaaataagtaaa
gataagaaagatgttgttaaggaattaaaagcaaaagcaaaaaaagcagatgctgtttat
cttgcaactgaccctgaccgtgaaggagaggcgatttcttggcatcttgcgaatgaatta
ggcgttgatcttgatcaggataatcgagttgtttttaatgagattaccaaagatgctgtt
ttaagtgcattcgaatcaccacgtcatattgatatgaacttggtgaaatcacaagagaca
cgtcgtattcttgaccgtattataggttttaaattgtctaagttattacaagctaagatt
aaaagtaaaagtgcagggcgtgttcaatctgtagcgctgaaattaatcgtagatcgtgaa
aaagaaattgatgcatttacacctgaagaatactggtcagtgcttgcgttctttgagaat
gaaggaaatatcattgaaactagtgcagaacgtttcaaaggtaaaaagttaaagctcaca
aatgaagcagaagcacaagctgtgctcgatgcagctcaagggtcctttaacattacgaaa
cttgagaagaaaaaacgtaagaaggaatcaaaacttcctttcattacttccacacttcaa
caagaagcatcaacacgtcttggttttcctgcaaagaaaacaatgcgtgttgctcaaaaa
ctttatgaaggaattcagatgggtgcggatacagaaggtttaattacttatatgcgtacc
gattcaacgcgactcagtaatgtttttgttgaagatgcaaaagcatttatcgttgaagaa
tacggaaaagaatatttaggtaaataccgtcaaggtaaaaagactgaaaatacacaggat
gctcatgaggctatccgaccaacaagtatttctcgtcgtcctgaagaagttaaatcttac
ctaacaccggatgaatataaattatatcgttttatttactatcgaacactcgcatccctt
atggcaccttccatttcggattcagtaagtgttgtttttagtcaaaatgattatgatttt
aacgggagtggttcaatcatgacctttgatggttacttaaaggtatatgagtatgaaaaa
actaccgataaagtaatgggtgagttggatgaaacgaaagcgtataatgcgcaaaaaatt
gaaaagaaccaacactttacacaaccaccagcacgttatacggaagcacgtttaattaaa
gaactcgaagaattgggtattggtcgaccaagtacctactcaatgattttagaaacgatt
gtttatcgtgcctatgcaacgtttggtgccgtttccgagacatcgaaaacgaaggtcttt
aaacctacagatcaagggattttaacgaacgaaaaacttcaagaacacttctcggacatt
attaatgttcactacacagcgaatatggaagatgaattagaccggattgctgaaggagaa
gaaaataatgttgaagcgttacagcgttttgtagataagttctatccattgcttgaagaa
gcagatgaaaaaatggaaaagattgaagttgaaaaagttggtgaagtttgtcccgattgt
ggcggcgagcttgtttaccgatttggtcgttatggaaaattcatagcttgtggaaacttc
ccggagtgtcgttataatcgcgccttggatcaagataaacgtcccgagcctgaaaagact
ggggaagtctgtccagactgcggtgaacccttagtaaaacgtaagagtcgttatggtaca
ttctttgtaggatgttctgggttccctaaatgtcgttatattcaacctaatgaaaatgca
aaaaaaccaaaaacaaaaaaacccgaagaagtgtcagcggaacatgaacctttaggtgaa
gaaattaaagattaa
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