KEGG   Erysipelothrix rhusiopathiae Fujisawa: ERH_0905
Entry
ERH_0905          CDS       T01525                                 
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
erh  Erysipelothrix rhusiopathiae Fujisawa
Pathway
erh03030  DNA replication
erh03430  Mismatch repair
erh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:erh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ERH_0905 (polC)
   03430 Mismatch repair
    ERH_0905 (polC)
   03440 Homologous recombination
    ERH_0905 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:erh03032]
    ERH_0905 (polC)
   03400 DNA repair and recombination proteins [BR:erh03400]
    ERH_0905 (polC)
Enzymes [BR:erh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ERH_0905 (polC)
DNA replication proteins [BR:erh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ERH_0905 (polC)
DNA repair and recombination proteins [BR:erh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ERH_0905 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP HHH_6 DNA_pol3_a_NI RNase_H_2 DNA_pol_A_exo1 T2SSK DEDDh_C HHH_3 zf_Tbcl
Other DBs
NCBI-ProteinID: BAK31960
LinkDB
Position
complement(959632..963933)
AA seq 1433 aa
MTEIFDKLGINKNYSFHFEDADIISCKYNPEKKKLILNVKVMNALPFSVYRELTKKLKLY
TKTDVELIVQSNHCELDFLNISQYTDMIVRANNLSAVKEASLQLVDKQLKLLCIDQHHQE
ATLRECNALCDALKSLGIDLEVDAEISTGSLEDEVSEMPKIDKVEVVDRKVVSRVPKRRN
GKGNYNPIKMSLLTDEARDVSVAGKVFDVEVRETRTGKFIAKYYLSDGESAICVVDFADT
EEEIISKGICIRVFGTYVFDAKYERDYIFKMDRYEEIDNIFRRFDTADEKRVEFHLHTKF
SEMDGINDASEYMAQAFEWGHPGMIITDHTGVQGFPKAYGNLKKLRSKYPNHEFKLGYGV
EMNMVDGELKIVSNAHGESLQTGSYVSFDLETTGLSNYYDHIIEFGGVLIENGRVVKKMQ
TFIKAPVPVRPFIQELTNITDADLVNAPSIEEAMDEILEFLGDHVLVAHNAQFDIDFIQE
TLRRIGKEPIQNAVIDTLDLSRALFDNRRSYRLGSIARFMRIGYDEGVAHRADYDAEVLS
LVFLEMLRLEQLSTMQTIDDLQSLNNESSFKKLRKSHCTVIAKTQSSIKDLYQLITLSHT
KYLAFFGKTSKGDAVMAEPRILRRELERFRENLLIGAGCTNSELFEIAMNKSQEALERCV
AFYDYVEIMPLDLYAPLLESQAIESESRLLDIINRIITTATKLNKPILAVGNVHYNHPSE
KVIRDVYIHSQGIGGSRHPLYIFNEQRRMAFEAPNQHFRSTNEMLDAFAFLGADKAYEYV
VKNPVKLLNEIEDISPKKKELFTPHLENSDELLKDIVYHNAHKLYGNPLPELVQARIERE
LKSIFGNGYGVIYYISHLLVKKSLDDGYLVGSRGSVGSSLVATMAEITEVNPLAPHYVCD
NCHYNEFFLNGEYSSGFDLDPKDCPNCGKALHCEGQDIPFETFLGFEGDKVPDIDLNFSG
DYQEFAHAYTKEIFGEEYVYRAGTISTVAQKTAFGYVLGYHESMNITNSNNAWNTYLAIG
AEGVKRTTGQHPGGIIVVPDYMDVHDFTPIQYPANNPDSTWYTTHFEFHDIDDNVLKLDI
LGHVDPTAMKMLERLTGVDIHDVPMNDKKTLSLFGSTEALDVDERKYHEVTGGLGLPEFG
TPFVRGMLEATRPNKFSDLVRISGLSHGTDVWRNNAEELIKQGLAFDKVIGCRDDIMVDL
MHYGLEAKEAFTIMESVRKGRGLTDEWIASMKRNNVPEWYIDSCLKIKYMFPKAHAVAYV
MMAIRVAWFKVYYARAYYAVYFTLRVNAYEIETMCASQEIVASRLNSINMRLKSFDTKKD
VTIKEKNLIDTLEVTLELQSRGYKVSPLDLELSKATEFSLDPRDDKAILPPFNVVDGLGD
NVARQLVKAREEQPFISKKDLMTRGGISSTSVKKLDELGVTSHLQDSNQMSLF
NT seq 4302 nt   +upstreamnt  +downstreamnt
gtgaccgaaatttttgacaaacttggaattaataaaaattattcatttcattttgaggat
gcggacattatctcgtgtaagtataatccagaaaaaaagaaattgattctcaacgtgaag
gtaatgaatgcattacctttttcagtctatagagagttaacgaaaaaattaaaattgtat
acaaaaacggatgttgagcttattgttcaatctaatcattgtgaacttgattttttaaat
atcagtcaatatacggatatgattgttcgtgcgaataatttaagtgctgtaaaagaagca
tctttgcaacttgttgataaacagcttaagttattatgtattgatcagcatcaccaagaa
gcaacgttacgagagtgtaatgctttgtgtgatgcattaaaatcattgggtattgatctt
gaagtggatgcggaaatttcaacgggaagccttgaagatgaggtatccgaaatgcctaaa
attgataaagtggaagtagttgatcgaaaagttgtttccagagttccgaaacgacgaaat
ggtaaaggaaactataatccgataaaaatgagtttacttacggatgaagcacgtgatgtt
tcggtagcgggtaaagtctttgatgtagaagttcgtgaaacaagaacagggaaattcatt
gcgaagtattatttaagtgatggggaatctgcaatttgtgttgttgattttgcggacact
gaggaagaaatcatttccaaaggtatttgtatccgtgtttttggaacctatgtgtttgat
gcgaaatatgaacgtgattacatttttaagatggatcgttatgaggaaattgataatatt
ttccgtcgttttgatacagctgatgaaaaacgtgtcgagtttcatttacatacgaagttt
tctgagatggacggaattaatgatgcctcagaatatatggcgcaagcttttgaatggggc
catccgggtatgatcattacagatcataccggtgttcaaggttttccgaaagcatatggt
aatcttaaaaaattacgatcgaaatatccgaaccatgaatttaaattgggatacggtgtt
gagatgaatatggttgatggtgagcttaaaattgtttcgaatgctcatggtgaatcacta
caaacaggatcctatgtttcttttgacttggaaacaacaggtctttcaaattattatgat
cacatcattgaatttggaggggttttaattgaaaatggtcgcgttgttaagaagatgcaa
acatttataaaagcgccggttccggttagaccttttattcaagaactaaccaatataacg
gatgcagatctcgtgaatgcgccgtcaattgaagaagcgatggatgaaattttagaattc
ttaggcgatcatgtgctagtggcccataatgcgcagtttgatattgattttattcaagaa
acacttcgtagaattggaaaagaaccaattcaaaatgcagtgattgatactttagattta
tcacgtgcactctttgataatcgacgctcatatcgtttgggaagtattgcacgatttatg
cgaattggttatgacgaaggtgttgctcaccgtgctgattatgatgccgaagtattatcg
cttgtattcttagaaatgttacgtcttgagcaattgagtacgatgcagacgattgatgat
ctccaatctttaaataatgaatcaagttttaaaaaattacggaaaagtcattgcactgta
attgctaaaacacaatcaagcattaaagatctatatcaattaataaccctttcgcataca
aaatatcttgcattttttggtaaaacgtcaaaaggggatgcggtcatggcagagccaaga
attttaaggcgtgaattagaacgattccgtgagaatttactaataggagcagggtgtacc
aattctgaactctttgaaattgctatgaataaaagtcaagaagcacttgagcgttgcgtt
gcgttttatgattatgtagagattatgcctttagacttatatgctcctttgttggaaagt
caggcaattgaaagtgaatcacgtttactagatattattaatcgtattataacgacagct
acaaagctcaataaaccgatattagctgttgggaatgtacactataaccatcctagtgaa
aaagtaatccgcgatgtttacatccattcacaggggattggtggctcacgtcatccctta
tatatttttaacgaacaacgccgaatggctttcgaggccccaaaccaacattttagaagt
accaatgaaatgttggatgcattcgcatttctaggtgcagataaagcctacgagtatgta
gttaaaaaccctgtaaaattattaaatgaaattgaagatatttcacccaagaaaaaagag
ttgtttacacctcatcttgaaaacagtgatgagctcctcaaagatattgtttaccataat
gcgcataagctctatggaaatccactccctgaacttgttcaggcacgaattgaacgagaa
cttaaatcaatttttggaaatggttacggtgttatttactatatttctcatcttcttgtg
aaaaagtcgctcgatgacggttatctagtagggtctcgtggttctgttggttcttctctt
gttgctacgatggctgagattaccgaggttaatccgcttgcgcctcattacgtttgtgat
aattgccattacaatgagttctttctaaatggtgagtactcttcgggatttgacttagac
cctaaagattgtccgaattgtggcaaagcgttacattgtgaaggccaagatattccgttt
gaaacgtttttaggattcgaaggtgataaagtacctgatatcgatttaaacttttcagga
gactaccaggaatttgcacatgcatacaccaaagaaatatttggtgaggaatatgtttat
cgcgcaggtacgatatcaacggttgcgcaaaaaactgcatttgggtatgttctgggttat
cacgagagtatgaatattacaaatagtaataatgcatggaatacctatcttgccatagga
gcagaaggggttaaacgaacaacaggacaacatcctggtgggattattgtggttccagac
tatatggatgttcatgattttacgcctattcaatatccagcaaacaatccggattctacg
tggtatacaacacatttcgaatttcatgatattgatgataatgtacttaaactcgatatc
ttaggacatgtggatccaacagcgatgaaaatgttagaacgtttaaccggtgttgatatt
catgatgtaccaatgaatgacaagaaaaccttatcactttttggttcgacagaggcctta
gacgtcgatgagcgcaaatatcatgaagtcactggtggattgggattgcctgagtttgga
actccatttgttcgtggaatgcttgaagcaactcgcccgaataagttctcggatttagtg
cgtatatcaggtctttctcatggaaccgatgtttggcgtaataatgctgaagaattaatc
aaacaaggattagcgtttgataaggtaattgggtgtcgagatgatatcatggttgatctc
atgcattatggtcttgaagcgaaggaagcatttaccatcatggaaagtgttcgaaaagga
cgcggacttaccgatgaatggattgcttccatgaaacgaaataatgtacctgagtggtat
attgattcgtgtctaaaaatcaagtacatgttccctaaggcgcatgctgtagcttatgtt
atgatggcgattcgtgtagcgtggtttaaggtttattatgcgagagcttattatgcagtg
tactttacattgcgagtaaacgcttatgagattgaaacgatgtgtgcatcacaagaaata
gtcgcaagtcgtttaaactcaattaatatgcggttaaagagttttgataccaaaaaagat
gtaacaattaaagaaaaaaatctaattgatacactggaggtaacacttgaactccaaagt
agagggtataaagtaagtcctctagatttagagttgtcaaaggctacggagttcagtctg
gatccccgcgatgataaagcaattcttccaccgtttaacgtagtggatggtttgggtgat
aacgttgcccgacaacttgtgaaagcacgcgaagaacaaccatttatatccaaaaaagat
ctgatgacgcgaggtggaattagttctacttcggtcaaaaaactggatgagttgggtgtt
acttcccatttacaagatagtaatcagatgagtttgttttaa

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