Erysipelothrix rhusiopathiae Fujisawa: ERH_1079
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Entry
ERH_1079 CDS
T01525
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
erh
Erysipelothrix rhusiopathiae Fujisawa
Brite
KEGG Orthology (KO) [BR:
erh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erh03400
]
ERH_1079 (sbcD)
DNA repair and recombination proteins [BR:
erh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ERH_1079 (sbcD)
Archaeal homologous recombinant proteins
ERH_1079 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAK32134
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All DBs
Position
complement(1159842..1160981)
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AA seq
379 aa
AA seq
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MKIVHIADLHIGRRLNDLSLLEDQRYVLNQIIESLDTIKPHVLLIAGDVYDKANPSAEAF
EVWNDFLTQLSHRSIHVLIISGNHDSQERLGVGRALFEEHDIYLVSHYTGSIPVVTLQDD
LGPVHFHMIPYIKPSMVRNYHPEFTGTTFQEAFEFIFQDLKINQEDRNVAIAHQFVIGNG
TTPILSDSEIGPSVGGLDAIDASLFQKFDYVALGHIHRTQAIGRETIRYAGSPLKYSFSE
CMHTKQLPIIDLDRDVAISFVELKPLRDVRILKGPLQHLYELGKEDRTEDYIHAILTDDI
IQGDALHKLRSVYQNLVSLDFDNARTSSKSSLSRATEILDQKPFDLFNAFFTTLNGRDFN
QEESDIVKAMIDEIQEESL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatagttcatatagcagatttacatattggtcgaagactgaatgacttaagtctt
cttgaggatcaacggtatgttttaaaccaaatcattgaaagcttagataccatcaaaccg
catgttttattaattgcgggggatgtctatgacaaagcaaatccaagtgcagaagcattt
gaagtatggaatgattttttgacgcagttatcccatcggagtatccatgttttaatcatt
tcggggaatcatgattctcaagaacgtcttggtgtaggtcgtgcactttttgaagaacac
gatatttatttagtgtctcactatactggttctatcccggttgtgacactgcaggacgat
ttaggacccgttcattttcacatgattccttatataaaaccgtccatggtgcgaaattac
catcctgagtttacaggaacaacgtttcaagaagcgtttgagtttattttccaagattta
aagataaatcaagaagatcgtaatgttgcgattgcgcaccaatttgtgattggtaatgga
acgacacccatactatctgattcagaaattggaccctctgtagggggcttggatgcgatt
gatgcgtcattgtttcaaaagtttgattatgtagcgttagggcatattcatcgcactcaa
gcgattggacgtgaaacgattcgttacgccggttcaccgttaaaatattcattctctgaa
tgtatgcatacaaaacaattgcctattatcgatcttgatagggatgttgcgatatcattt
gtggagcttaagcctttgcgagatgtccgaattctcaaaggcccattacaacatctttat
gaattaggtaaggaagatcgcactgaagattatattcatgcgattttgaccgatgatatt
attcaaggggatgcacttcataaattacgaagtgtttatcaaaatcttgtaagtttggat
tttgataatgcacgtacatcgtcaaagtcatccctatcacgggctactgagattttagat
caaaagccgtttgatctttttaatgcctttttcacgacactcaatggtcgtgactttaat
caagaggagtctgatattgtgaaagcaatgattgatgaaattcaggaggaaagtttatga
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