Erysipelothrix piscisicarius: EEI45_01930
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Entry
EEI45_01930 CDS
T05733
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eri
Erysipelothrix piscisicarius
Pathway
eri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EEI45_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eri03019
]
EEI45_01930
03009 Ribosome biogenesis [BR:
eri03009
]
EEI45_01930
Enzymes [BR:
eri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EEI45_01930
Messenger RNA biogenesis [BR:
eri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EEI45_01930
Ribosome biogenesis [BR:
eri03009
]
Prokaryotic type
rRNA helicases
EEI45_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AZK43711
UniProt:
A0A3Q8S6X0
LinkDB
All DBs
Position
397658..399409
Genome browser
AA seq
583 aa
AA seq
DB search
MIMVYYHGVLKEVGKLMTFKELELEEEIVRAVIEKGYEEPTDIQSQAIPMLLGNHDLLAQ
SQTGTGKTAAFGLPMLSLTQPGDKKRTNSLILCPTRELCMQVAEEMRSFSKYKQGVNIAC
VYGGSPIDKQIRDLKRGADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIE
DIEEIFSFLPEERQFAFFSATMPKEIGKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVE
SRDKVDLTIQLLQLHKTSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVM
GRFKKGMVSVLIATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITL
VSRRQRYAIKQIERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGKLFNIAYE
GLRKENFTQEEIIIAFINKMISESNLEAIKVSKQKDVKNKGEISRIGLSVGDRDGISAAH
LVSAIATASGIRGKDIGRIKIDDNESTVEVPREFAQDIINKLSETKINNKDVNVTMVDEF
AQPTPRGGRSGRGGRDSRRGGGNDRRRDGGRRSNDQSRRNNKG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgataatggtatactatcacggtgtgttgaaagaagtaggaaaattaatgacatttaaa
gaactagaattagaagaagaaatcgtaagagccgtaatcgaaaaaggttacgaagagcca
acagatatacaatcacaagcaattccaatgttgcttggtaatcatgacttattagctcaa
tctcaaacaggtacaggtaaaactgcggcgtttgggttaccaatgctaagtttgactcaa
cctggagataagaaacgaacaaattcgttaatcctatgtcctacacgtgagttatgtatg
caagtggctgaagaaatgagaagtttctcgaagtataaacaaggggttaacatcgcatgt
gtatacggaggtagccctattgataaacaaattagagaccttaaacgtggagcagacatt
gtagttgcgacaccaggtcgtttaatggatcatattcgacgtaagacaatccgtttagat
gattgccgtcatattgtcttggatgaagctgatgaaatgctaaatatgggatttattgag
gatattgaagaaatcttttcattccttcctgaagaacgccaattcgcattcttctcagca
acaatgcctaaggaaatcggtaaattaagcgagaaatttttggttgaaccagaaagaatc
acactatctcgtaacaatctaactgtttctcgtattaaacaaatctattacactgttgaa
tcaagagataaagttgatttaacaattcaattattacaattgcataaaacaagtggaaca
atgatattctgtaataccaaaaaaatggttgatgaacttacaacgcaattaaacaaagcg
ggattccctgctttagggttacatggagacatgaaacaagaaatgcgttcaatggtaatg
ggccgttttaaaaaaggtatggtttctgtgttaattgcaaccgatgttgcggcacgtgga
atcgatgttgacagtatggatgtagtgataaactacgatatacctcaagaattagaatat
tatgtacaccgtattggacgtacaggtcgtgctggtaaagaaggtcttgcgatcacttta
gtatcacgtagacaacgttatgcaattaagcaaatcgaacgtttatcaaattcaacaatc
gttgaaacaccactaccaactaaagaacaattaaatgacttaatggtagatcaacttgct
cgtgaaatccgtaaatggaatgatcatgagcaaggaaaactctttaatatcgcttatgaa
ggtcttcgtaaagagaacttcacacaagaagaaattattattgctttcattaataagatg
attagtgaatcaaacttagaagcaatcaaagtttcaaaacaaaaagatgttaagaataaa
ggtgaaatatcacgtattggactatccgttggagatcgtgatgggatctctgcagctcac
cttgtaagtgcaatcgcaactgcaagtggaattcgcggaaaagatattggacgtattaaa
attgatgataatgaaagtacagtggaagttccccgtgaatttgcacaagatattattaat
aaattatcagaaacaaaaattaataataaagacgtgaacgttacaatggttgatgaattt
gcacaaccaacaccacgtggtggacgtagcggacgcggaggacgtgactcacgtcgtggc
ggtggaaatgatcgtcgccgtgatggcggaagacgttcaaacgatcaaagtcgtcgtaac
aacaaaggataa
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