Erysipelothrix piscisicarius: EEI45_05095
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Entry
EEI45_05095 CDS
T05733
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eri
Erysipelothrix piscisicarius
Pathway
eri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EEI45_05095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eri03400
]
EEI45_05095
Enzymes [BR:
eri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EEI45_05095
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EEI45_05095
DNA repair and recombination proteins [BR:
eri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EEI45_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Zn_ribbon_8
DUF7573
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AZK44206
UniProt:
A0A3S8RMQ4
LinkDB
All DBs
Position
1003866..1004687
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AA seq
273 aa
AA seq
DB search
MPELPEVETIVRTLEKSLKGKRIISINFIYPKLLETQSEYPLEALEGTYFKDFHRRGKYL
WFEMSNGLHWILHLRMEGKFHLYDEVKVPSKHTHCVINFDGGTIHYLDTRKFSRMAVVSD
PIRYLETKNLGFEPFDPNLSGDYLYQKIHQSNRVMKTILLDQSIIAGIGNIYADEILFEA
QIHPLTTGSKISKKQCDMIVETAQVILMNAIKAGGTTIRSYTSSLNVTGRFQVNLNAYGK
AGEPCSRCGKTLERIVVSGRSTVFCGKCQKVRR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccagaagttgagacgattgtacggaccctagagaagtcactgaaagga
aaacgtataatttcaattaattttatttatccaaagcttcttgaaacgcaatcggagtat
ccactggaggcattagaaggaacatattttaaggatttccatcgtcgaggaaaatatttg
tggtttgagatgtcgaatggtttacattggattctgcatttgagaatggaaggcaaattt
cacctatacgacgaggtaaaagtgccatctaaacatactcattgcgttattaattttgat
ggaggaacgattcactatctggacacgcggaaattttcgcgtatggctgtcgtatcggat
ccaattcgatatttagaaaccaaaaatttaggatttgaaccgtttgaccctaatttaagt
ggtgactatctatatcagaaaattcatcaatccaatcgtgttatgaaaacgatcttacta
gaccaaagtattattgcgggaattggcaatatctatgcagatgagatactttttgaagca
caaattcatccacttaccaccggatcaaaaatatcaaaaaaacagtgtgatatgattgtt
gagacggcacaagttattttgatgaacgcaatcaaggcgggtggaacaactattcgttct
tacacgtcctcgcttaatgttactggtcgtttccaagttaatttgaatgcctatgggaaa
gcgggggaaccgtgttcacgatgtgggaagaccttggagcgcattgtagtatcaggacga
tcaactgttttttgcggaaaatgtcagaaggtgagacgatga
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