Erysipelothrix piscisicarius: EEI45_06700
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Entry
EEI45_06700 CDS
T05733
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
eri
Erysipelothrix piscisicarius
Pathway
eri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EEI45_06700 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eri03019
]
EEI45_06700 (rny)
Messenger RNA biogenesis [BR:
eri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EEI45_06700 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AZK44457
UniProt:
A0A3S8RNJ5
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Position
complement(1347427..1348983)
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AA seq
518 aa
AA seq
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MDNQLLYSVLTGIIVFILTIFAMIVVNKLGLNRSKERANSLIKDAEEKAESIKREAHLEA
KTHAYEIKLNAEKELKGQRKELQEYENKLDRREENLNFRDANLVTKDKEMLNKQRDLEAR
TAKLDKMEQALIERTEVQLRELERVAHMPASEAKTELFEVVEKQMEQEVLTYIREQEEMA
HQRAEDIARNIISLAISRYAQEETTQRTSSVITLPSEEMKGRIIGREGRNIRAFENATGV
DLLIDDTPEIITLSCFDPIRREVARMALDTLMTDGRIQPGRIEEVVDKARKELYQVINKT
GQDTLFDLGISKMDKEIVTILGRLKYRYSYGQNALAHSIEVANLAGMMAAELGLNQKLAK
RAGLLHDIGKGLDFEIEGSHVDLGVRLAKKHNEHPIVINAIASHHGDTEATSAIAVLVAA
ADTLSAARPGARFESFENYIQRLEELEAIASTREGVQRAFAIQAGRELRVVVVPDEIDDL
QTVKLARDIRQQIEEELTYPGQIKVTVIRELRAMELAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaactattatattccgtcttaactggtattattgtttttattttgacaatt
tttgcgatgattgtcgtgaataaattaggtttaaaccgttcaaaggaacgtgcaaattca
ttaattaaagatgctgaagaaaaagcagaatcaataaaaagagaagcacatttagaagcg
aaaactcatgcttatgagatcaaactaaatgctgaaaaggaacttaaggggcagcgtaag
gaactccaagaatatgaaaataaattggatcgccgtgaagaaaatctaaattttcgcgat
gcaaacttagtgactaaagataaagaaatgttgaataagcaacgtgacttagaggctaga
actgccaaactagataagatggagcaggcgttaatcgaacgcacagaggttcaattaaga
gaattagaacgagttgctcatatgcctgcatcagaagcaaaaacagaactattcgaagtt
gttgaaaaacaaatggagcaagaagttcttacttacattcgtgaacaagaagaaatggct
catcaacgggctgaagacatcgcaagaaacataatttctcttgctatttcgcgatatgca
caagaagaaacaacgcaacggacctcttcggtcattaccttgccaagtgaggaaatgaag
ggccgtattattggtcgtgaaggacgtaatatccgtgcatttgaaaatgcaacgggtgtc
gatctattaatcgatgacacacctgaaattattacattatcatgttttgatccaattcgt
cgtgaagttgcacgaatggcattggatacgcttatgactgatggtcgaattcaaccaggt
cgtattgaagaagttgttgataaagcacgtaaagaactttatcaagttattaataaaacg
ggtcaggataccttgtttgatttaggtattagtaagatggataaagaaattgtaaccatt
ctgggacgtctgaaatatcgttatagctatggtcaaaatgccttggctcatagtattgag
gttgcgaatttagcggggatgatggccgctgaacttggcttaaatcaaaaacttgcgaag
cgtgcaggtctgctccatgatattggtaagggtcttgattttgaaatcgagggtagccat
gtggatttaggggtacgtttagcgaagaaacataatgaacatccaattgtgattaatgca
attgcatcacatcatggtgatactgaagcaaccagtgcgattgccgtacttgtcgcagcg
gcggatacattaagtgcagcacgaccaggcgcacgctttgagtcatttgaaaattatatt
caacgtcttgaagaacttgaagcgattgcatcaactcgtgaaggagttcaacgtgcattc
gcaattcaagcaggtcgtgaattacgtgttgtggttgtaccagatgaaatcgatgatctt
caaacggtaaaactagcacgcgatattcgtcaacaaatagaagaagaactcacatatcct
ggtcaaattaaagtgactgtgattcgtgaattacgcgcaatggagttagctaagtaa
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