Erysipelothrix piscisicarius: EEI45_07220
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Entry
EEI45_07220 CDS
T05733
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eri
Erysipelothrix piscisicarius
Brite
KEGG Orthology (KO) [BR:
eri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eri03032
]
EEI45_07220 (topA)
03400 DNA repair and recombination proteins [BR:
eri03400
]
EEI45_07220 (topA)
Enzymes [BR:
eri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EEI45_07220 (topA)
DNA replication proteins [BR:
eri03032
]
Prokaryotic type
DNA Topoisomerases
EEI45_07220 (topA)
DNA repair and recombination proteins [BR:
eri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EEI45_07220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
DNA_ligase_ZBD
DUF5795
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AZK44546
UniProt:
A0A3Q8S7Z5
LinkDB
All DBs
Position
complement(1449363..1451417)
Genome browser
AA seq
684 aa
AA seq
DB search
MKNLVIVESPSKSKTIEKYLGEDFEVVSSKGHIRDLATTGKGGLGVDFDNDFEATYKISK
DKKDVVKELKAKAKKADAVYLATDPDREGEAISWHLANELGVDLDQDNRVVFNEITKDAV
LSAFESPRHIDMNLVKSQETRRILDRIIGFKLSKLLQAKIKSKSAGRVQSVALKLIVDRE
KDIDAFTPEEYWSVLAFFENEGNIIETSAERYKGKKLKLTNEAEAQAVLDASQGPFKITK
LEKKKRKKESKLPFITSTLQQEASTRLGFPAKKTMRVAQKLYEGIQMGADTEGLITYMRT
DSTRLSNVFVDDAKAFIVEEYGKEYLGKYRQGKKTENTQDAHEAIRPTSISRRPEAVKSY
LTPDEYKLYRFIYYRTLASLMAPSISDSVSVVFSQNDYDFNGSGSIMTFDGYLRVYEYEK
TTDKVMGELDEAKAYNAQKIEKNQHFTQPPARYTEARLIKELEELGIGRPSTYSMILETI
VYRAYATFGAVSETSKTKVFKPTDQGILTNEKLQEHFSDIINVHYTANMEDELDRIAEGE
ENNVEALQRFVDKFYPLLEEADEKMEKIEVEKVGEVCPDCGGELVYRFGRFGKFIACGNF
PECRYNRALDQDKRPEPEKTGEMCPDCGEPLVKRKSRYGTFFVGCSGFPKCRYIQPNENA
KKPKTKKPKEASTEHEPLGEEIKD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttagtaattgttgagtcaccttcaaaatctaaaacaattgagaagtatctt
ggtgaggattttgaggttgtttcttcaaaaggtcatatacgagatttagcgacgaccggt
aaaggcggtctgggtgttgattttgataatgactttgaagcaacttataaaataagtaaa
gataagaaagatgttgtaaaagaattaaaagcaaaagcgaagaaagcggatgctgtttat
cttgcaactgaccccgaccgtgagggagaggcaatttcttggcatcttgcgaatgaacta
ggcgttgatctcgatcaagataatcgtgttgtttttaacgagattacaaaagatgctgtt
ttaagtgcatttgaatcaccacgtcatattgatatgaatttggtaaaatcacaggaaaca
cgacgcatacttgaccgaattattggttttaaactttcaaaattattgcaagctaaaatt
aaaagtaaaagcgcaggtcgagtgcaatcagttgcgttaaaactaattgtagatcgcgaa
aaagatattgatgcatttacaccagaagaatactggtctgttctcgcattttttgaaaat
gagggaaatatcattgagacaagtgcagaacgttataaagggaagaaactaaaacttacg
aatgaagcagaagcacaagcagtattggatgcatcacaaggaccttttaaaattacaaag
cttgagaagaagaaacgtaagaaagaatcaaaacttcctttcattacatcgacacttcaa
caagaagcatcgacacgtctcggttttcctgcaaagaaaaccatgcgtgtcgctcaaaag
ctttatgaaggaattcagatgggtgcagatacagaaggtttgattacctatatgcgtacg
gattctacacgtcttagcaatgtgtttgtggatgacgcaaaggcatttattgtagaagaa
tatggtaaagaatatttaggtaaataccgtcaaggtaagaaaactgaaaatactcaggat
gctcacgaggcaatccgaccaacaagtatttcgcgtcgccccgaagctgtgaaatcttac
ctgacccctgatgaatataaattatatcgttttatttattaccgaacacttgcatcgctt
atggcaccatccatttccgattcagtaagtgttgttttcagtcaaaatgattatgatttt
aatggtagtggatcgattatgacatttgacggttacttaagagtatatgaatacgaaaag
acaaccgataaggtcatgggtgagttggatgaagcaaaagcttataatgcacaaaaaatt
gaaaagaaccagcactttacacaaccacctgcacgctatacagaagcgcgcttgatcaaa
gaattggaagaattgggaattggtcgtccaagtacctattcaatgattttggaaacgatc
gtttaccgtgcatatgcaacatttggtgcagtttcggaaacatctaaaactaaagtcttt
aaacctactgaccaaggaattctaacaaacgaaaaacttcaagaacatttttcggatatt
atcaacgttcattacaccgcaaatatggaagatgagcttgatcgtattgcggaaggtgaa
gaaaacaatgttgaagcactgcaacgatttgtcgataaattttatccattgcttgaagaa
gctgatgaaaaaatggaaaaaatcgaagttgagaaagttggagaggtttgtcccgactgt
ggcggtgaacttgtttaccgatttggacgttttggtaaatttattgcatgtggtaacttc
ccagagtgtcgatacaatcgtgcgctggatcaagataaacgtccagagcctgaaaaaacg
ggcgaaatgtgtccggattgtggtgaacctttagtaaaacgtaagagccgttacggaacg
ttctttgtaggatgttcaggattccctaaatgtcgatacattcaacccaatgaaaatgct
aagaaaccaaagacgaaaaagccgaaagaagcgtcaacggagcatgaaccattaggtgaa
gaaattaaagattaa
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