Erwinia sp. Ejp617: EJP617_02040
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Entry
EJP617_02040 CDS
T01935
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03030
DNA replication
erj03430
Mismatch repair
erj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJP617_02040 (dnaE)
03430 Mismatch repair
EJP617_02040 (dnaE)
03440 Homologous recombination
EJP617_02040 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erj03032
]
EJP617_02040 (dnaE)
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_02040 (dnaE)
Enzymes [BR:
erj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJP617_02040 (dnaE)
DNA replication proteins [BR:
erj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJP617_02040 (dnaE)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJP617_02040 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADP09885
LinkDB
All DBs
Position
complement(221178..224660)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGSLVKYAASMGMPAIGITDFTNLCGLVKFYGTAHGQ
GMKPIIGADFNVSSEAMGDELTQITVLAADNDGYQNLTLLISRAYQRGYGPAGPTIDRDW
LAEHQQGLILLSGGRRGDVGKMLLRGNPTQVNECLNFYQQYFPDRYYLELIRTGRPDEET
YLHAAVELAVARGVPVVATNEVCFLAESDFDAHEIRVAIHDGFTLDDPKRPRHYSPQQYL
RSEEEMCELFSDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGEMSTEDFLVVKSKQGL
EERLEFLFPDEKLRAVRRAEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRKAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTQITDFAPLYCDENGDHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINAKRAKSGEAPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKARGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDTKKMNRRMLEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYSDVKPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGQRLKDMHPTERGKMTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKFQHMLEKDRILIVSGQVSFDDFNGGLKMMARDMMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPYRSGTIPVHLYYQREDARAKLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcatttacgcgttcacagcgactactccatgatcgatggg
ctggcgaaaacgggctcattggtgaaatacgcggcaagcatgggtatgccggccatcggc
atcacggactttaccaacctgtgtgggctggtgaagttttatggaacggcgcacggccag
ggcatgaagccgattattggcgcagatttcaacgttagcagtgaagcgatgggcgatgag
ctgacgcaaatcaccgtattagccgccgataatgatggctatcagaacctgacgctgctg
atttcacgcgcctatcagcggggttacgggccggcggggccgaccatcgatcgtgactgg
ctggctgaacatcagcaggggctgatcctgctctccggcggtcgtcgtggcgatgtcggc
aaaatgctgttgcgcggtaaccctacgcaggttaacgagtgtctgaacttctatcagcaa
tattttcccgatcgctattaccttgagctgatccgcaccgggcgtcctgatgaagagacg
tatctgcacgcggcggtagaactggcggtcgcgcggggtgtgcctgttgtcgccaccaac
gaagtctgcttcctggccgaatcagactttgatgcgcatgagatccgcgtggcgatccac
gacggtttcacccttgacgatcccaagcgcccgcgccattacagcccgcagcagtatctg
cgcagcgaggaggagatgtgcgagctgttctcggacattccggaagcgctggaaaacagc
gtagaaatagcccgtcgctgcaacgtcaccatccgtcttggcgaatatttcctgccgcag
ttcccgaccggcgagatgagcacggaagatttccttgtggtgaaatcgaagcagggcctg
gaagagcgtctggaatttctgttcccggatgagaagttacgtgccgtgcgccgtgctgaa
tatgatgaacgtctggatattgagctgaacgttatcaatcagatgggcttcccaggttac
ttcctgatcgtcatggagttcatccagtggtccaaggataatgatgttcctgtcggacca
gggcgcggttcaggggcgggttcgctggtggcctatgcgctgaagatcaccgacctcgat
ccgctggaatttgacctgctgtttgaacgtttccttaacccggaacgcgtttctatgccc
gattttgacgtcgacttctgcatggaaaaacgcgacctggtgattgagcacgttgcggag
atgtacggccgcaaggcggtgtcacagattatcaccttcggtacgatggcggcgaaagcg
gttatccgcgacgtcgggcgcgtgttgggccatccttatggctttgtcgatcgtatctcc
aaactggtgccgcccgatcctggcatgacgctggaaaaagcctttgccgccgaaccgcag
ctgccggaaatttacgaagcagacgaagaggtaaaagcgctgatcgatatggcgcgcaag
ctggaaggcgtgacgcgtaacgccggtaaacatgccggtggcgtggtgatcgcgccaacg
caaatcaccgattttgcccccctgtactgcgatgaaaacggcgaccatccggtcacccag
tttgacaaaaatgatgtggaatatgccgggctggtgaagtttgatttcctcggtctgcgc
acgctaaccattattgactgggcgctggcgatgattaacgccaagcgtgcaaagagcggt
gaagcgccgattgatatcgctgcgattccgcttgaagataaaaaaagtttcgatatgctg
caacgctcggagaccacggcggtattccagcttgaatcgcgcggcatgaaggatttgata
aagcgcctgaagcctgactgtttcgaggacatgatcgcgctggtggcactgttccgtccg
gggccgttacagtccggcatggtggataactttatcgaccgtaagcacgggcgcgaagag
atatcctacccggatattcagtggcagcatgagtcgcttaagccggtgctggagccgacc
tatggcatcatcctgtatcaggaacaggtgatgcagatagcccaggtgctggccggttac
agccttggcggggcggacatgttacgccgtgcgatgggtaaaaagaacccggtggaaatg
gccaagcagcgaggcggcttcgaagacggggcgaaagcacgcggcgtagacggcgaactg
gcgatcaaaattttcgacctggtggagaagttcgccgggtacggctttaacaaatcgcac
tctgccgcctatgccctggtttcctatcaaaccctgtggttgaaagcgcattacccggcg
gagtttatggcggcggtgatgacggccgatatggacaacaccgaaaaggtggttggcctg
gtggatgagtgctggcggatggggctgaaggtactgccgccggacattaattccggcctg
taccagttccatgtcaatgacgatggcgaaatcgtttacggcatcggcgcgattaaaggg
gtcggtgaaggtccgatcgaagcgattatagaggcgcgtaacgagggcggttatttccgc
gagttatttgacctctgcgcgcgtaccgacaccaaaaaaatgaaccgccggatgctggaa
aaattaattatgtccggtgcgtttgaccgtttaggtccgcatcgtgccgccttaatgagt
gcgctgccggatgcgttaaaagccgccgaccagcacgctaaggcagaggcgattggtcag
gtggatatgtttggcgtgctggcagaagccccggagcaggtggagcagtcctattcagac
gtcaaaccgtggccggaacagattcagctggacggcgaaagggaaaccttagggctttac
ttaaccggccacccgatcaaccagtatctgaaagagattgagcgctacgtcggtggacag
cgcctgaaagacatgcacccgaccgagcgtggtaaaatgaccaccgccgccggtctggtg
gtggcggcccgcgtgatggtaactaaacgcggtaaccgtattggcatctgcacgctggat
gaccgttctggtcgcctggaagtgatgttatttacagatgcgttagacaagttccagcat
atgctggagaaagaccgtattctgatcgtcagtgggcaggtcagcttcgatgacttcaac
ggcgggcttaaaatgatggcccgtgatatgatggacatcgatgaagcacgcgaaaaatat
gcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcaatcccttgaaccttatcgttcggggacaattccggtacatctctactatcag
agagaagatgcgcgggcaaagttgcgctttggtgcaacctggcgcgtgtcgccgagcgat
cgtttgttaaacgatctgcggtcgttgataggatcggagcaggtggaactggagtttgac
taa
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