Erwinia sp. Ejp617: EJP617_04890
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Entry
EJP617_04890 CDS
T01935
Symbol
holD
Name
(GenBank) DNA polymerase III, psi subunit
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03030
DNA replication
erj03430
Mismatch repair
erj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJP617_04890 (holD)
03430 Mismatch repair
EJP617_04890 (holD)
03440 Homologous recombination
EJP617_04890 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erj03032
]
EJP617_04890 (holD)
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_04890 (holD)
Enzymes [BR:
erj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJP617_04890 (holD)
DNA replication proteins [BR:
erj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJP617_04890 (holD)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJP617_04890 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
ADP10170
LinkDB
All DBs
Position
complement(537975..538439)
Genome browser
AA seq
154 aa
AA seq
DB search
MLAKSGPPAIGQEKMMSPRRDWFLQQMGITQYTLRRPRALQGEIAITLPAETRLVIVADN
PPMLHDPLVADVLRALNLHQPQVQVLTPDQLAMLPDDACCPSWRLGLEAPVTLAGTQIAS
PVLAELYHNAEAKRSLWQQICQHESDFFTHSARP
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgaaaagcggccccccggcaatcggacaggaaaaaatgatgtctcccagacgt
gactggttcttacagcaaatggggattacgcagtatacgctgcggcgtccgcgcgccttg
cagggcgagatcgcgataacgttacccgctgaaacccgcctggtgatcgtggcggataat
ccgcccatgctgcacgacccgctggtggcggacgttttacgcgccctgaatctgcatcaa
ccgcaggtgcaggtacttaccccagaccagctggcgatgctgccggatgatgcctgctgt
cccagttggcgtttagggctggaagccccggtgacattagccggaacccaaattgcttcg
cccgtactggcggagctttatcacaatgccgaggccaaacggtcgctctggcagcaaatt
tgccaacatgaatcagatttctttactcactctgcacgaccttga
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