Erwinia sp. Ejp617: EJP617_13800
Help
Entry
EJP617_13800 CDS
T01935
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJP617_13800 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erj03019
]
EJP617_13800 (rhlB)
Enzymes [BR:
erj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EJP617_13800 (rhlB)
Messenger RNA biogenesis [BR:
erj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJP617_13800 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP11061
LinkDB
All DBs
Position
complement(1531030..1532322)
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKT
MAFLTSTFHHLLSHPAPEGRQVNQPRALILAPTRELAVQIHADAEPLAQISGLKIGLAYG
GDGYDKQLKVLESGVDVLIATTGRLIDYAKQNHVNLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSFRVRELAFENMNNAEYVEVEPDQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRTIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGDVDILVATDVAARGLHIPAVTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLA
CEEYALNLPAIEEYIGHSIPVSRYNSDALMGDLPPPKRLTRNRSGNGPRRGGNNNRRSSA
PRSPNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacagaacagaagttttccgacttcgccctgcaccctcaggtg
atcgaagcccttgaaactaaagggtttcataattgcacgcctattcaggcgctggcatta
ccttttacgctctccgggcgtgatgtagcaggtcaggcgcaaacaggtaccggcaaaacg
atggcgtttctgacgtcaacgttccatcatcttctttctcaccccgctccggaaggccgt
caggttaaccagccccgcgcgctaatcctcgccccaacgcgcgaactggcggtacagatc
catgcagacgccgagccgctggcacaaatatcgggcctgaagatcggcctggcctatggc
ggagacggttatgataaacagctaaaagtactggaaagcggtgtcgatgtgctgatcgca
acaacgggccgtttaatcgattacgctaaacaaaatcacgtcaacctgggcgccatccag
gtagtggtactcgacgaagctgaccgtatgtttgacctcggcttcattaaagatattcgc
tggttattccgtcgcatgcctgccgctaaccagcgcctgaatatgctgttctccgccacc
ctgtcgttccgcgtacgcgagctggcgtttgagaacatgaacaatgccgaatacgttgaa
gtcgaaccggaccagaaaaccgggcatcgtattaaagaagaactgttctacccctccaac
gaagaaaaaatgcgtttgctgcaaacgctgattgaagaagagtggccggatcgcaccatc
atcttcgccaataccaagcatcgttgcgaagatatctggggccatctggctgctgatggc
catcgtgttggcctgctgaccggcgatgtcgcgcagaaaaagcgcctgcgcattctcgat
gacttcaccaaaggtgatgtcgatattctggtggccaccgacgtggccgcacgcggtctg
cacattcccgcagtgacccacgtctttaactacgacttgcctgacgaccgtgaagattac
gtacaccgtattggtcgcaccgggcgtgcgggcgctaacggtcattctattagtcttgcc
tgtgaagagtacgcgctgaacctgccggccatcgaagagtatatcgggcacagcattccg
gtcagccgttataacagtgatgcgctgatgggcgaccttccgccgccgaagcgtttgacc
cgcaaccgttcaggtaatggcccgcgtcgtggcggtaacaataaccgccgcagcagtgca
ccgcgtagccctaaccgcaaacgttcaggttaa
DBGET
integrated database retrieval system
