Erwinia sp. Ejp617: EJP617_15270
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Entry
EJP617_15270 CDS
T01935
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJP617_15270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erj03019
]
EJP617_15270 (pnp)
03016 Transfer RNA biogenesis [BR:
erj03016
]
EJP617_15270 (pnp)
Enzymes [BR:
erj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EJP617_15270 (pnp)
Messenger RNA biogenesis [BR:
erj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EJP617_15270 (pnp)
Transfer RNA biogenesis [BR:
erj03016
]
Prokaryotic type
tRNA degradation factors
EJP617_15270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ADP11208
LinkDB
All DBs
Position
1705906..1708038
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AA seq
710 aa
AA seq
DB search
MLNPIVKKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKSKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALALSGLPFNGPIGAARVGYLNDQYVLNPTSDELKESKLDLVVA
GTKGAVLMVESEAELLSEEQMLGAVVFGHDQQQIVIDNINALVAEAGKPRWDWQPEAVNE
ALRSRIAALAESRLSDAYRITEKQERYAQVDVIKSETTAALLAEDEALDAGEISDLLHAL
EKDVVRSRILRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKGDA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKDDNNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILSVMEQA
ISGPRGDISQFAPRIHTIKISVDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEAGEQAQPEAEAAPATPEAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaacccgatcgtaaaaaaattccagtatggccagcacaccgtcactcttgaaacc
ggaatgatggctcgccaggccacggcagccgttatggtaagcatggatgacactgctgtt
ttcgtcaccgtggttggtcagaaaaaatcaaaacctggtcaggacttcttccctctgacc
gtcaactaccaggagcgtacctacgctgctggccgtattccaggcagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaacgctcacctcgcgcctgattgaccgcccaatccgt
ccgctgtttccggaagggtttgtcaatgaagtgcaggtgattgccaccgtggtctccgtt
aaccctcaggttaacccggatatcgtcgccatgatcggtgcttctgctgcgctggcgctg
tctggcctgccgtttaacggacctatcggtgcggcacgcgtcggttacctgaacgatcag
tacgtgcttaacccaaccagcgatgagctgaaagagagcaagctggatctggttgttgcc
ggtactaaaggtgcggtgctgatggttgagtctgaagccgagctgctgagcgaagagcag
atgctgggggcggtggtatttggccacgaccagcagcagatcgtcatcgataacatcaat
gcgctggttgctgaagcgggcaaaccacgttgggactggcagccagaagcggttaacgag
gcgttgcgttcacgcattgctgcactggccgagtctcgcctgagcgatgcttatcgcatt
actgaaaagcaggagcgctacgctcaggttgatgtcatcaaatctgaaaccacggctgcg
ctgctggcggaagacgaagcgctggacgctggtgaaatcagcgatctgctgcacgcgctg
gaaaaagacgtggtacgcagccgcattctgcgtggcgaaccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtgcgcaccggcgtgctgccgcgtactcacggctcc
gcgctgttcacccgtggtgaaactcaggcgctggttaccgccacgctgggtactgcccgt
gatgcgcagaacctcgacgagctgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactctgtcggcgaaactggcatggtgggttcgcctaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgtggcgtgctggccgtgatgccaaaaggcgatgct
ttcccgtataccgtgcgtgtggtgtctgaaatcactgaatcaaacggctcgtcttcgatg
gcgtctgtttgtggtgcgtctctggcgctgatggatgcaggcgtgccaatcaaggccgct
gtagccggcatcgcgatgggtctggttaaagacgacaacaactttgttgtgctgtccgat
atactgggcgacgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgaa
ggcatcaccgcgctgcagatggacatcaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggcgaagggtgcgcgtttgcacattctgagcgtcatggagcaggct
atcagcggtccgcgtggcgatatttctcagtttgcaccgcgtatccacaccatcaagatc
agcgttgataaaatcaaagacgtgatcggtaaaggtggctcggtcattcgtgcgctgacg
gaagaaaccggcaccactatcgaaatcgaagatgatggcacggtgaaaatcgcggctacc
gacggtgaaaaagctaaatttgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtgggtcgtatctacaacggtaaagtgacgcgcatcgttgattttggtgcctttgtggcc
atcggtggtggtaaagaaggtctggtacatatttctcagatcgccgacaagcgtgtagaa
aaagtgacagactatctgcagatgggccaggaagttccggtgaaagtactggaagttgac
cgccagggtcgcgtacgcctgagcatcaaagaagctggcgaacaggctcagcctgaagca
gaagccgctcctgccacaccagaagccgaataa
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