Erwinia sp. Ejp617: EJP617_18080
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Entry
EJP617_18080 CDS
T01935
Symbol
recJ
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03410
Base excision repair
erj03430
Mismatch repair
erj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EJP617_18080 (recJ)
03430 Mismatch repair
EJP617_18080 (recJ)
03440 Homologous recombination
EJP617_18080 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_18080 (recJ)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EJP617_18080 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EJP617_18080 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EJP617_18080 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ADP11489
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Position
1981201..1982919
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AA seq
572 aa
AA seq
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MNSKTELRRREAADVAALPADLNPLLRRLYAHRGVSCASELERGAKNLHPFQSLSGIEKA
VTLLQHALADNQCIMIVGDFDADGATSTALAVLSLRGMGAQNVKYLVPNRFDDGYGLSPE
VVEQAAARGAQLIVTVDNGISSLAGVALAHQKGIAVVVTDHHLPGEILPDADAIVNPNLS
DCAFPSRALAGVGVAFYLMLALRARLRDGGVNGLPNLAELLDLVALGTVADVVPLDANNR
ILVWQGLSRIRAGKCRPGIRALLEVANRDARQLAASDLGFALGPRLNAAGRLDDMSVGVA
LLLSEDLGQARMLASELDALNQTRKEIEQGMQSEALTLCNRLESTSEALPLGIAMYHPEW
HQGVVGILASRLKERFHRPVIAFAPAGDGMLKGSGRSITGLHMRDVLERLDTLHPGLIVK
FGGHAMAAGLSLEEAKFDEFRQRFADLVGDWLDAESLQGVVWSDGELMAQELTLPTAELL
REAGPWGQAFPEPTFDGKFKLLQQRLVGERHLKVMIEPLGGGTLLDGIAFNVDTALWPDP
SVKQVELAYRLDVNEFRGTRSVQLIIDHLWAL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtaaaactgaactccgtcgccgtgaggcggcggatgttgccgcactccccgcc
gatctgaacccgttattacgccgtctgtacgctcatcgtggcgtttcctgtgccagtgaa
ctggagcgcggagcgaaaaatttgcatccattccagtctcttagcgggatcgaaaaggcg
gtcaccctcctgcaacacgcgttagccgacaaccagtgcattatgatcgtgggtgatttt
gacgcagacggtgcgaccagcaccgcgctggccgttctgtcgctgcgcggtatgggcgcg
cagaacgtcaaatatctggtgcctaaccgctttgatgatggctacggtctgagtcctgaa
gtggtggagcaggcagcggcacgcggggcgcagctgattgtgaccgtcgataacggtatc
tcgtcgcttgccggtgtggcgttggcccatcagaaaggcattgcggtggtcgtcaccgat
caccatctgccgggcgagatcctgccggatgcggacgctattgtgaatcctaacctcagt
gactgcgcattcccttcgcgcgcgctggcgggggtgggcgtggcgttttacctgatgctg
gcgctgcgcgcccggctgcgtgacggcggggtgaacgggttgccgaacctggcggaactg
ctggatttagtggcgctcggtaccgttgctgatgtggtgcctctggatgccaacaaccgc
atcctggtgtggcaggggctgagccgcattcgcgccggtaagtgccgtcccggtattcgt
gcgctgctggaggtagccaaccgcgatgcgcggcagctggccgccagtgatttaggattt
gccctcgggccacggctgaatgccgccggtcggctggacgatatgtcggttggggtggcg
ctgctgctcagtgaggatctcgggcaggcacgcatgctggccagcgaactggatgcgctc
aatcaaacgcgtaaagagattgagcagggaatgcagtcggaagcgctgacgctgtgcaac
cgtctggagagtaccagcgaagcgctgccgctgggcattgcgatgtatcatcctgaatgg
catcagggcgtggtgggtattctggcctcccggctgaaagagcgttttcaccgcccggtg
attgctttcgctccggcaggggacggcatgctgaaaggctcgggtcgttctattaccggg
ttgcatatgcgcgacgtccttgagcggctggatacgctgcatccggggctgatcgttaaa
ttcggcggccacgcgatggcggcaggtttgtcgctggaagaggcaaaatttgacgagttc
cgccagcgctttgccgatctggtcggcgactggctggatgcggaatcgctacagggcgtg
gtgtggtctgacggtgagctgatggcgcaggagttaacactgcccactgctgaactgctg
cgtgaagccggtccctgggggcaggcgttcccggaaccgactttcgacggcaagtttaag
ctgctacagcagcggctggtgggggagcgtcacctgaaggtgatgattgagccgcttggc
ggcggcacgctgctggacggtatcgcttttaacgtcgataccgcgctgtggccggatccg
agcgtgaagcaggtcgagctggcctataggctcgacgtcaatgagttccgtggcacgcga
agcgtgcagctgataatcgaccatctctgggcgctttag
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