Erwinia sp. Ejp617: EJP617_18710
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Entry
EJP617_18710 CDS
T01935
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJP617_18710 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_18710 (recB)
Enzymes [BR:
erj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJP617_18710 (recB)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJP617_18710 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ADP11552
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All DBs
Position
2067065..2070601
Genome browser
AA seq
1178 aa
AA seq
DB search
MSQRAAETLEPLSLPLHGERLIEASAGTGKTFTIGLLYLRLLLGLGGAAAFSRPLSVEEI
LVVTFTEAATAELRGRIRANIHELRIACIRGKSPNLMLAALIAEIADLPQAASVLLAAER
QMDEAGIFTIHGFCQRMLNLNAFESGMLFDQQLLEDETPLRRRAAADFWRRYCYPLPLPV
ARVVRQLWAGPEQLLKTLSPWLGGEAPVLKSAPESDETLEQRHEKIIARISMLKQAWLAA
GNLQQVIDASGVDRRSYNSKHLPNWLEKISLWAQAETQDYQLPKDLERFGQRILLEKTKK
GEPPRHPLFDQIDAFLAEPLSLRDLVIARALQQVRFVTQQEKRLHGQLGFDDLLGRFDFA
LQQPGGEALASAIRQRYPVALIDEFQDTDPQQYRIFRTLYRRQADSALLLIGDPKQAIYA
FRGADIFTYMKARSEVSAHYTLETNWRSSPAMVNAVNQLFLRQKNPFLFNEIPFINVNPA
APNHGLNFSVQGKVQPALQFWLQPGNGVGVSDYQQFMARQCAAEICRWLTAGQQGEALIG
NAGKQSPVQASDITVLVRSRSEAAVVREALNALAIPSVYLSNRDSVFTTPEAREMLWLLQ
AVLAPEQERVLRSALATSLFGTDALALDALSQDERAWDALVDEFVDYRQRWLQRGVLPML
RELMMKRQIAENLLASDSGERRLTDLLHVGELLQEASATLDSEHALVRWLAQQVEQPDGQ
SSVQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFVANFREANNGVYHDRQTFTALLDLQ
QSEESIELAEQERLAEDLRLLYVALTRSVFHCSVGIAPLIKGARKKEGNSDLHCSALGYL
VQQGEPADASGLLAALQALNGDAIALMRPAEADATPWQAQQTEPQILSSRTLPRSLRDNW
RVTSYSGLQQHGHSIALELLPRLDVDAAGEASNEPVPQLTPHTFPRGAGPGTFLHGLFET
LEFTTPLDEEWLAQQLSSQGLGDEWQPVMRDWVERILHTPLNETGVSLYQLPAQARKAEL
QFYLPISRLLTAEALDRVVRQDPLSQPCPPLDFHQVQGMLKGFIDLVFCWQGKYYLLDYK
SNWLGEDSSAYTREAMAQAMQAHRYDLQYQLYTLALHRYLRHRLVVYDYQQHFGGVIYLF
LRGLDGAAGSNGIYFTRPQPEFVTALDQLFASPPESNL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacgagccgctgaaacgctggagccgctgagccttcccctgcacggcgagcgg
ctgattgaagcttcggccgggacgggaaaaaccttcaccatcgggctgctctatctgcgg
ctgctgctcggcctgggaggggcggcggccttcagccgcccgctgtcggtagaggaaatt
ctggtcgttaccttcaccgaggctgccaccgccgagctgcgcgggcgtattcgtgccaat
atccacgagctgcgcatcgcctgcattcgtggtaaaagcccgaatctgatgctggcggca
ttaatagcggagatcgccgatctgccccaggcggcatcggtgctgctggcggccgagcgt
caaatggacgaagccggtatttttaccattcacggcttttgccagcgcatgctgaatctc
aatgcctttgagtccggtatgctgtttgatcagcagctgctggaagatgaaacgccgctg
cgccgccgggcggcggccgatttctggcgtcgctattgttatccgctgccgctgccggta
gcacgcgtggtgcgccaactgtgggcggggccggagcagttactgaaaaccctgtcgccg
tggcttggcggcgaagcgccagtgctgaaatcggcgccggagagcgatgagacccttgag
cagcgccatgagaaaatcattgcgcgcatcagcatgttgaaacaggcgtggctggcggcg
ggtaatttacagcaggtgattgacgcttccggcgttgatcgccgcagctacaatagtaag
cacttaccaaactggctggagaaaatctccctgtgggcgcaggcagagacgcaagactac
cagctgccaaaagaccttgagcgcttcggccagcgcatcctgctggagaaaacgaaaaaa
ggtgagccgccacgtcaccccctgttcgatcaaattgacgcctttctcgccgagccgctg
tcgctccgtgacctggtgattgcccgcgcgctgcagcaggttcgctttgtcacccagcag
gagaaacgactgcatggccaactgggatttgacgatttgctggggcgcttcgattttgcc
ctccagcagccgggtggtgaggcgctggcttcagctatccgccaacgttatccggtggcg
ctgatcgatgaattccaggacaccgacccgcagcagtatcgtattttccgcacgctatat
cgtcggcaggctgacagtgcactgctactgatcggcgacccgaaacaggcgatctacgcg
tttcgcggcgcggatatctttacctatatgaaagcgcgctctgaagttagcgcccactat
acgctggagactaactggcggtcgtctccggcaatggttaatgcggtcaatcagctgttt
ttacgccagaaaaacccgttcctcttcaacgaaataccctttattaacgtcaatccggct
gcgcctaatcacggcctgaactttagcgtgcagggtaaagtgcagcctgctctgcagttc
tggctacagcccggtaatggagtgggggttagtgattaccaacagtttatggcgcgtcag
tgcgcggcggaaatctgccgctggctcactgcgggtcagcagggcgaggcgttaatagga
aatgccgggaaacagagtccggtacaggcctcggacattaccgtgctggtgcgcagccgc
agtgaagccgcagtggtgcgcgaagcgttaaatgctctggctattccgtcagtttacctc
tccaaccgtgacagcgtatttaccacgccggaagcgcgcgaaatgctgtggctgttacag
gcggtgctggctccggagcaggagcgcgttctgcgcagcgcgctggccaccagcctgttt
ggcaccgatgcgctggcgcttgatgcgctcagccaggacgaacgcgcatgggatgcgctg
gtggatgagttcgttgattatcgccagcgctggctgcaacgcggcgtgctgccgatgctg
cgtgagctgatgatgaaacgccagatagccgaaaacctgctggcctccgacagcggtgaa
cgccggttgaccgatctgctgcatgtgggcgaactgttgcaggaagcctctgccaccctc
gacagcgaacatgcgctggtgcgctggctggcgcagcaggtggagcagccggatggccag
tcatccgttcagcagctgcgtctggagagcgatcgccatttggtacagattgtcactatc
cacaaatccaaaggtttgcagtatccgctggtgtggctgccgtttgtcgccaactttcgc
gaggcgaataacggcgtttaccatgaccggcagacgtttaccgcgttgcttgatttacag
cagagcgaggaaagtatcgaactggcggagcaggagcggctggcggaagatctgcgattg
ctctacgtcgcactgactcgttcggtatttcactgtagcgttggcatcgcgccgctgatt
aagggcgcacgtaagaaagagggcaacagcgacctgcattgcagcgcgctgggctatctg
gtgcagcagggggaaccggccgatgcctccggcctgctggcggcattacaggcgttgaac
ggtgatgccatagcgttaatgaggccagcagaggcagatgccaccccgtggcaggcgcag
caaacggagccgcaaatcctcagcagccggacgctgccacgctcgctgcgtgataactgg
cgcgtgaccagttattccggtctgcaacagcacggccattcaattgcgctggaattgctg
ccgcgcctcgacgttgatgcggccggggaagccagcaatgaacccgttccgcagctgacg
ccgcataccttcccgcgcggtgccgggccgggaacatttcttcacgggctgtttgaaacg
ctggaattcaccactccgctggatgaagagtggctggcgcagcaactcagcagccagggg
ctgggggatgagtggcagccggtgatgcgcgactgggttgagcgcatcctgcataccccg
cttaatgagacgggcgtcagcctttaccagctgccagcacaagcaaggaaggcggaactg
cagttttatttgccgatctcccgtctgctgacggcagaggcgctggacagggtggtacgt
caggacccgctgtcgcagccctgccccccgctcgactttcaccaagtgcagggcatgctg
aaaggttttatcgatctggtgttctgctggcagggtaaatattacctgctggactataaa
tctaactggctgggcgaagacagcagcgcctatacgcgggaggcgatggcgcaggcgatg
caggcgcatcgttatgatttgcagtaccagctttacacgttggcgctgcaccgctatctg
cgtcaccgtctggttgtttacgactaccagcagcactttggtggcgttatctatctgttt
ctgcgtggtctggacggtgcggctggcagtaacgggatttactttacccgaccgcagccg
gaatttgtcaccgctctcgaccaactgtttgccagccccccggagagtaacctatga
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