Erwinia sp. Ejp617: EJP617_20680
Help
Entry
EJP617_20680 CDS
T01935
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
erj
Erwinia sp. Ejp617
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_20680 (sbcC)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJP617_20680 (sbcC)
Archaeal homologous recombinant proteins
EJP617_20680 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
ABC_tran
AAA_21
NTPase_1
nSTAND3
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP11749
LinkDB
All DBs
Position
complement(2278450..2281809)
Genome browser
AA seq
1119 aa
AA seq
DB search
MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LGGITSTQNDLMTRDSAECLAEVEFEVKGVAWRAFWSQNRARGAADGNLQAPRVELARCK
DNHIVADKAKEKQDMITSLTGLDFERFTKSMMLSQGQFAAFLNAKASERAELLEELTGTE
IYGRLSSAVFERHKEAKATLDGLRAQAAAMDLLDAEQQQTLADQQTQLISDERVLTSQQQ
SQQQALQQLQQLERLQQEQQQLSRQRQQLDEQIEQAKRQLGAADLEQQQALKNHEDHQLH
RQQQETLIAEQVIPLDHQLATLQEQSEQLARERSEHQQLLTARLTESAKNQQIQQDKQAQ
QQRLNQWHEAHPHFSHYGEYLPLWRERFSQQQQSEQSLSALSQRLKVQQQTLQQQELAHR
QLIQQAVPLQQQLDAAQHSLNQAQQALAPLQQQHPQESLRNALEQFSRLRPQRQLLATLL
PQWRQLGERRSRLKREQQALAQQIQQYSEQLQTLRSRWAEKRQHEQDLDKRCRLEQRIAD
LEQQRALLEPGQPCPLCGSENHPAIAEYQALEPSENQQRLNGLREEVRVLGEQGSACSAQ
LKQQQELAQRQQQDDADLARQATELEQQWHSAASALALEFTADQHQQAHDWLAQQEQQES
ELQQQLNRQEQAMRHCQQQQEALYQQQQAWQQLERQTALHQQEITATRHNLSEQQQQLEQ
DRQRAMQLRSELAASLAPLELKLPEDGDYPGWLQIREQQWRQWQQNASELATLAPELAAL
GSRQQALEEERVQQQARINALDARSQQQQQILSERQQQRQQLFGDATVNSLRQQLNDESE
KHLQTLRQYQQQRQVQQDRINTLTGQRKSLTEQSINLQSRLDEATTRTDQPENLTAQQQT
LQVSLEALSLQLRELASQQGQLLQQLEYDATRRLQQQALLAEVAANERQMEDWSYLNDLI
GSQNGSKFRRFAQGLTLDHLVSLANTQLSRLHDRYQLQRKPQEALELEVIDTWQAETRRD
TRTLSGGESFLVSLALALALSDLVSHKTRIESLFLDEGFGTLDAETLDSALDALDALNAS
GKTIGVISHVEAMKERIPVQIRVRKVNGLGYSRLDLPGG
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcaccctgcgttttaaaaacctcaactcgctgaagggcgagtggaaaatc
gattttacggcagaaccctttgccagcaacggcctgtttgccattaccgggccaacgggc
gcggggaaaaccaccctgcttgatgccatctgtcttgcgctttatcacaagaccccgcgc
ctggggggaattaccagtacacagaacgacctgatgacgcgcgatagcgcagaatgcctc
gcagaggtggaattcgaggtgaaaggcgttgcctggcgcgccttctggagtcagaaccgc
gcacgcggtgccgccgatggcaatctgcaggcaccgcgcgtcgaactggcgcgctgcaag
gataaccatatcgtcgccgataaggcgaaagagaagcaggatatgatcaccagcctgacc
gggctggatttcgagcgctttaccaagtcaatgatgctgtcccagggacagtttgccgcc
tttcttaatgccaaagcgagcgaacgcgccgagctgctggaagagctgaccggcaccgaa
atttatggccgcctgtcgtcggcggtatttgagcgccacaaagaggcaaaggcgacgctg
gacgggctgcgcgcgcaggcagcggcgatggatctgctggatgcggagcagcagcaaacc
cttgctgaccagcagacacagctgataagcgatgagcgggtactcacttcacagcagcaa
agccagcagcaggcgttacagcagctgcaacagctggaaaggttacagcaggagcagcag
cagctttcccgccagcgccagcagctcgatgaacagatagagcaggcaaagcggcagctt
ggcgcggcagaccttgagcaacagcaggcgctgaagaaccatgaggatcatcagctgcat
cgccagcagcaggaaacgctgatcgccgaacaggtcatccctctggatcaccagctcgcc
acgctgcaagaacagtctgagcagctggctcgcgagcgaagtgagcaccaacaattgctg
acagcgcgcctgacggagagcgctaaaaaccagcagatccagcaggataagcaggcgcag
cagcagcggctgaaccagtggcacgaagcgcatccccatttttctcactacggtgagtat
ttacccctgtggcgtgaacgtttcagccagcagcagcaaagtgagcagtcactttcagcg
ctaagccagcggctaaaggttcaacagcaaacgctgcagcagcaggagctggctcaccgg
cagcttatccagcaggcggtgccactgcagcagcagcttgatgcggcgcagcacagcctg
aaccaggcgcagcaggcgctggccccgttacaacagcagcacccgcaggaaagtctgcgc
aacgcgctggagcagtttagccgtctgcgcccgcaacgccagctgctggctacgctgctg
ccgcagtggcggcagctcggtgaacgccgcagtcggctaaagcgggagcagcaggcgtta
gcgcaacagatacagcaatatagtgagcagttacaaaccctgcgcagccgctgggcagag
aaacgccagcatgagcaggacctggacaaacgctgcaggctggagcagcgcatcgccgac
ctggagcagcagcgcgccctgctggaaccgggtcagccctgcccgctgtgcgggtcagaa
aaccatccggcgattgccgaatatcaggcgctggagccatcagaaaatcagcaacggctt
aacggcctgagggaagaagtgcgggtgctcggcgaacagggcagcgcctgtagcgcacag
ctaaaacagcagcaggaactggcgcagcgccagcagcaggatgacgccgaccttgcccgt
caggcaacggagctggaacagcagtggcacagcgccgcctccgcgctggcgctggaattc
accgccgatcaacatcagcaggcccacgactggctggcgcagcaggagcagcaggaaagc
gaacttcagcagcagctcaaccggcaggagcaggcaatgcgccactgccagcagcagcag
gaggcgctgtatcagcagcagcaggcgtggcaacagcttgaacggcaaaccgcgctgcac
cagcaggagataacggcgacacgccacaacctgagtgagcagcagcagcagctggagcag
gatcggcagcgggcgatgcagctacgcagcgaactggcggcaagcctcgcgccgctggag
cttaagctgccggaggacggcgattatccaggctggttacagatccgtgagcagcagtgg
cggcagtggcagcagaacgccagcgagctggccacgctggcaccggaactggcggcgctc
ggcagccgtcagcaggcgctggaagaggaacgggtgcagcagcaggcacgtattaacgcg
ctggatgcccgcagccagcaacagcagcaaatccttagcgaacgccagcagcagcgccag
cagctgtttggcgatgccacggtaaactcgctacgccagcagctcaacgacgagtcggaa
aagcatctgcaaaccctgcgccagtatcaacaacagcggcaagtgcagcaggatcggata
aataccctgacaggacagcgtaaatcactcactgaacagtcgattaacctacagtcacgg
cttgatgaggcgacaacccgcaccgaccagccggaaaacctgacggcgcagcagcagacg
ctacaggtcagcctggaggcgctcagtctgcaactgcgcgagctggccagccagcagggg
cagctgctccagcagctcgaatacgatgcaacacgccgcttacagcagcaggcgctgctg
gcggaggtggccgccaatgaacggcagatggaagactggagctatctcaatgatttgatt
ggctcccaaaacggcagtaagttccgccgctttgcccagggattaaccctcgatcatctg
gtatcactggcaaatacccagctaagccgcctgcacgatcgctatcagctccagcgcaaa
ccacaagaggcgctggaattagaggtgatcgacacctggcaggccgaaacccggcgcgat
acgcgcacgctgtccggcggcgagagcttccttgtcagcctggcgctggcactggcgctt
tccgatttggtcagccataaaacccgcattgaatcgctgttccttgatgaaggcttcggc
acgctggatgctgaaacccttgacagcgcgctggatgcgctggatgcgcttaacgccagc
ggcaaaaccattggggtaatcagccacgtcgaggcaatgaaagagcgcattccggtgcag
atcagggtaagaaaggttaacgggttgggttacagccggctggatttacccggcggttaa
DBGET
integrated database retrieval system
