Erwinia sp. Ejp617: EJP617_23350
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Entry
EJP617_23350 CDS
T01935
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
erj
Erwinia sp. Ejp617
Pathway
erj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJP617_23350 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erj03400
]
EJP617_23350 (uvrB)
DNA repair and recombination proteins [BR:
erj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJP617_23350 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJP617_23350 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_30
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADP12016
LinkDB
All DBs
Position
2554284..2556308
Genome browser
AA seq
674 aa
AA seq
DB search
MSKVFKLNSEFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTRGMVIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDYALRVELFDEEVERLSIFDPLTGQIESVIPR
YTIYPKTHYVTPRERILQAMEEIKEELVQRKKVLLDNNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGHYELEKSGGEVIDQVVRPTGLLD
PIVEVRPVATQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYLTEHGERVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLSGKAILYGDKITPSMARAIGETERRREKQQLHNEEHGIVPQGLNKKISDILELG
QGLAKNKAKPRNMKGRSIVEDDPAYVDLSPQGLQKRIHQLEAQMQQHAQNLEFEQAAQVR
DQLHQVRELFIAAS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcttcaaactcaactccgaatttaaacccgctggtgaccagccggaggct
atccgtcgcctgaaagaggggctggaagacggcctggcgcatcaaaccctgctcggcgtg
accgggtcgggtaaaacctttaccgtggctaacgtgattgccgacctgaaccgcccgacg
atggtgctggctccaaacaaaacgctggcggcgcagctgtacggcgaaatgaaggagttt
ttcccggataacgcagtagagtattttgtctcttattacgactactaccagcctgaagct
tacgttcccagctccgacacctttatcgaaaaagacgcttcggtgaacgaacacatcgag
cagatgcgtctgtcggccactaaggcgctgctggaacggcgtgacgtggtggtggtggca
tcggtatcggcgatttacggcctcggtgaccccgatctctatctgaaaatgatgctgcac
ctgacgcgcggtatggtgattgaccagcgcgccattctgcgccggctggcggagctgcaa
tatgcgcgcaacgaccaggctttccagcgcggtacgttccgcgtacgcggagaggttatc
gatatcttcccggcggagtccgatgattatgcgctgcgcgtggagctgtttgacgaagag
gttgagcggctgtccatttttgacccattaacaggccagattgagtcggtgatcccgcgt
tataccatctatcccaaaacccactacgtgacgccgcgcgagcgcatcctgcaggcgatg
gaagagatcaaagaagagctggtgcaacggaaaaaggtgctgctggataacaacaaactg
ctggaagagcagcgcctgagccagcgcacccagttcgatcttgagatgatgaacgagctg
ggctactgctccgggattgaaaactactcgcgctatctgtccgcacgcgggccgggcgaa
gcgccacccacgttgtttgactatctgcccgccgacggtctgctggtgattgatgaatcc
catgtgactattccgcaaattggcggcatgtaccgtggcgaccgggcgcgcaaagaaacg
ctggtggagtacggtttccgtctgccgtcagcgctggataaccgcccgatgaagtttgaa
gagtttgaagcgctggcaccgcagaccatctacgtttccgccacgccgggtcattacgaa
ctggaaaaatcgggtggcgaggtgatcgaccaggtggtgcgtcctaccggactgctcgat
ccgattgttgaagtgcgcccggtggcaacgcaggtggacgatctgctttctgaaatccgc
cagcgcgtggcgattaacgaacgcgtgctggtcacggtactgaccaaacgtatggcggaa
gatttaaccgaatacctcacagagcacggtgagcgggtgcgctatctgcactcggacatt
gataccgtggagcgcgtggaaatcattcgcgatctgcggctgggcaagtttgacgtgctg
gtagggatcaacctgctgcgtgaagggctggatatgcctgaggtttcgctggtggccatc
ctcgatgcagacaaagagggcttcttgcgttctgagcgttccctgatccagactattggc
cgtgctgcgcgtaaccttagcggtaaggcgatcctctacggcgataaaatcaccccgtcg
atggcgcgcgcaattggcgaaaccgaacgtcgccgtgagaagcagcagctgcacaatgaa
gagcacggcattgtcccgcagggcctgaacaagaaaatctccgatattctggagctgggc
caggggctggcgaagaacaaagccaaaccgcgtaatatgaaagggcgcagtattgtcgaa
gacgatccggcctacgtcgatctgtcgccgcagggactgcaaaagcgcatccaccagctg
gaagcgcagatgcagcagcatgcacagaatctggagtttgaacaggccgcccaggttcgt
gaccagctgcaccaggtgcgtgagctatttattgcggcgtcctga
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