Erwinia sp. Ejp617: EJP617_28100
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Entry
EJP617_28100 CDS
T01935
Symbol
ydiJ
Name
(GenBank) Uncharacterized protein ydiJ
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
erj
Erwinia sp. Ejp617
Pathway
erj00310
Lysine degradation
erj01100
Metabolic pathways
erj01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
erj00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EJP617_28100 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_17
Fer4_20
Fer4_18
Fer4_10
Fer4_9
Fer4_21
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
ADP12491
LinkDB
All DBs
Position
3046469..3049600
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AA seq
1043 aa
AA seq
DB search
MIKKCDKTDNCAVQATQTIYFNFGLPIMIPQISQAPGLEPQVLNFLAALKQQGFSGDTAT
SYADRLTMSTDNSIYQLLPDAVVFPRSTHDVAIIARLAADRFASLSFTPRGGGTGTNGQA
LNQGIVVDMSRYMTGILDINVAEGWVKVEAGVVKDQLNAWLKPYGYFFSPELSTSNRATL
GGMINTDASGQGSLVYGKTSDHVLGLKAVMLGGDILDTSAIPVSEAEERAKKAGKEGEIY
RVVLERCRQQRQLIIEKFPRLNRFLTGYDLRHVLSDNLDVVDLTRILCGSEGTLAFITEA
KLDITPIPEVRRLVNIKYDSFDSALRNAPLMVEAQALSVETVDSKVLNLAREDIVWHSVS
ELITDVADKEMLGLNMVEFAGNDQALIDSQVASLCQRLDRLMSQQQGGVIGYQLCDDVSG
IERIYGMRKKAVGLLGNAKGSAKPVPFVEDTCVPPQHLADYIVEFRALLDGHNLSYGMFG
HVDAGVLHVRPALDMCDPQQEQLMKQISDEVVELTARYGGLLWGEHGKGFRAEYSPSFFG
EELYNELRRIKTAFDPHNRLNPGKICPPLGVDHPMLKVDAIKRGSYDRQIPINVRGAWRG
AMECNGNGLCFNFDVKSPMCPSMKITRNRMHSPKGRATLTREWLRLLVEQGVDPLVLEKQ
LPARGVSLRGMIMRTRNSWQAKRGQYDFSHEVKEAMSGCLACKACSTQCPIKIDVPDFRS
RFLQLYHTRYLRPASDYLVATVESYAPLMARAPRTFNFFLRQPWVKSLSQRHIGMVDLPL
LSSPSLKQQLAGHRALTTTLEMLEQMTRAQRANCVLVVQDPFTSYYEAQLVNDFVKLIDK
LGYTAVLLPFSPNGKAQHIKGFLQKFARTAQKTADFLNRVAQLAMPLVGIDPALVLCYRD
EYKHVLGDKRGDFHVQLVHEWLQSTLAVHETPPQRGEPWYLFGHCTEAAALPGAVKQWET
IFARFGARLENVSVGCCGMAGTYGHETKNLENSLGIYQLSWQQALQKLPLQRCLATGYSC
RSQVKRVEGSPLRHPLQALLQLI
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
gtgataaaaaaatgtgataaaacggataactgcgcagttcaggcaacgcaaacgatttac
tttaactttggtcttccgataatgatcccacagatttcccaggcaccgggccttgagccg
caggtactgaattttttggctgcgttaaaacagcaaggtttcagcggcgacacggccacc
agttacgccgaccgcctgaccatgtccactgacaacagtatttaccagctgctgcccgat
gcggttgttttcccacgttcaactcacgatgtggccatcatagctcgcctggcggcagac
cgctttgcttcgctgtcatttaccccacgcggtggcggaaccggaaccaacggccaggcg
cttaatcagggtatcgtggtggatatgtcgcgctatatgaccggcattctggacatcaat
gttgctgaaggatgggtaaaagttgaagcaggcgttgttaaagaccagctcaatgcctgg
ctgaaaccctatggttatttcttctctcccgagctgtccaccagcaatcgcgctacgctt
ggggggatgatcaacaccgatgcctccggacaggggtcgctggtatacggtaaaacctcc
gaccatgtgctggggttaaaggcggtaatgctggggggggatatccttgatacgtcggca
atcccggtcagcgaggcagaagaaagggcgaaaaaagccggcaaagaaggtgaaatctat
cgtgtggtgctggagcgctgccgccagcaacgtcagctgattatcgaaaaattcccccgt
ctcaaccgctttcttaccggctacgatctgcgccatgtgctgagtgataacctcgacgta
gtcgacctgacgcgcatcctttgcgggtccgagggcacgctggcctttatcaccgaagcc
aaactggatatcactccgatacctgaagtacgccgtctggttaacattaaatacgattcc
tttgactcggcgctgcgtaatgcgccccttatggtagaggctcaagccctgtcggtggaa
accgtcgattcgaaggtgcttaatctggcgcgtgaagatatcgtctggcattcggtgagc
gagctgattaccgacgtagcggataaagagatgctgggcctgaacatggtcgaatttgcc
ggcaacgaccaggcgctaatcgacagccaggtagcatcactgtgccagcgccttgacagg
ttaatgtcgcagcagcagggcggagtgattggctaccagctgtgcgacgatgtttccggc
atcgagcgtatctacggcatgcgcaaaaaggccgtcgggctgctgggcaatgcaaaaggc
agcgccaagcctgtcccctttgtggaagatacctgcgtgccaccacaacatcttgctgac
tatatcgttgaattccgtgccctgctggatggccataacctgagctacggcatgtttggc
cacgttgatgccggggtgttgcatgtccgtccggcgttagatatgtgcgacccgcagcag
gaacagctgatgaagcagatctccgatgaggtggtggaactgaccgcgcgctacggcggg
ctgctatggggggaacatggcaaaggtttccgcgccgagtacagcccctctttcttcggc
gaggagctatataacgagctacggcgaatcaaaacggccttcgatccgcacaaccgcctg
aatcccggaaaaatttgtccaccgcttggcgtcgaccatccgatgctcaaagtggatgca
attaaacgcggtagttacgaccgtcagataccgatcaatgtgcgtggcgcatggcgcggg
gcgatggaatgcaacggtaacgggttgtgcttcaattttgatgttaaaagcccgatgtgc
ccgtcgatgaaaatcacccgcaaccggatgcattcgcctaaagggcgcgctacgctaacg
cgtgaatggctgcgactgttggtggagcagggggttgatcccctggtgctggaaaagcag
ctacccgccaggggtgtcagcctgcgcggcatgattatgcgcacccgtaacagctggcag
gcaaagcgaggacaatatgatttctcgcatgaggttaaagaggcgatgtcgggctgcctg
gcgtgtaaagcctgttccacgcaatgcccgatcaaaattgacgtccccgatttccgttca
cgttttttacagctgtaccacacgcgatatctgcgccccgccagcgattatctggtggca
acggtagaaagctatgcgccgctgatggccagagcaccacgcacctttaacttttttctg
cgtcagccgtgggtcaaatcgttgagtcagcggcatattggcatggtcgatttgccactg
ctgtcgtcgccgtccctgaaacagcagctggcgggtcaccgtgcactgacaaccacgctt
gaaatgcttgagcaaatgacccgcgcacagcgcgcaaactgtgtgctggtggtgcaggat
ccgttcaccagctattacgaagcgcagctggtgaacgattttgtgaaactgatcgacaag
cttggttataccgccgtgttgctgccgttctcgccgaacggcaaagcgcaacatatcaag
ggtttcttgcagaagtttgcgcgtaccgcgcaaaaaaccgcagatttccttaatcgtgtg
gcgcagctggcaatgccgctggtggggatagaccctgcactggtgctgtgctatcgcgac
gaatataagcacgttctgggagataaacgcggcgatttccacgttcagctggttcatgaa
tggcttcaaagtacgctggcggtgcacgagacgccaccgcagcgtggagaaccctggtac
ctgtttggccactgtacggaagcagccgcgctgccgggggcggtgaaacagtgggaaacg
atttttgcccgctttggggccaggctggaaaatgttagcgtgggatgctgtggcatggcc
ggtacttacgggcacgaaacgaaaaacctggaaaattcgttgggtatttatcagctttcc
tggcaacaggcgttgcaaaaactgccgctgcagcgctgtctggcgacgggctattcctgt
cgcagccaggtcaaacgtgtggaaggaagccctttacgccaccctctgcaggcattactt
cagctcatctga
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