Erythrobacter sp. KY5: CD351_03345
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Entry
CD351_03345 CDS
T05511
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
erk
Erythrobacter sp. KY5
Brite
KEGG Orthology (KO) [BR:
erk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erk03032
]
CD351_03345 (gyrB)
03400 DNA repair and recombination proteins [BR:
erk03400
]
CD351_03345 (gyrB)
Enzymes [BR:
erk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CD351_03345 (gyrB)
DNA replication proteins [BR:
erk03032
]
Prokaryotic type
DNA Topoisomerases
CD351_03345 (gyrB)
DNA repair and recombination proteins [BR:
erk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CD351_03345 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
DUF2239
Motif
Other DBs
NCBI-ProteinID:
AWW73461
UniProt:
A0A2Z4JY77
LinkDB
All DBs
Position
complement(693721..696228)
Genome browser
AA seq
835 aa
AA seq
DB search
MPEKNGADYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGHC
DLVLIELNPDGSVSVEDNGRGIPVDMHKEEGVSAAEVIMTQLHAGGKFENTSDDNAYKVS
GGLHGVGVSVVNALSEWLELVIWRNGKEHWMRFEHGDAVNSLEVKGDAPKVDQNPDEDGF
KKGTRVTFKASTDTFKNVIEFDFDKLEHRYRELAFLNSGVRILIRDLRHEEPIEHDLFYE
GGIAAFVKWLDRNKEALIAEPISVSAEKDGIGIDVALEWNDSYYENVLCFTNNIPQRDGG
THLAAFRAALTSTLNNYAERSGLLSKAKVSLSGEDMREGLTAIVSVKLPDPKFSSQTKDK
LVSSEVRQPLQSLMGEKMNEWLEENPGDAKAIIQKIVDAAAAREAAKRAREMSRKGAMSV
ASLPGKLSDCRERDATKAEIFLVEGDSAGGSAKGGRDSQYQAILPLKGKILNVERARFDR
IISSKEVGTLIQAMGTGIRDEFDLEKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEI
VKAGHLFIAQPPLFKVAKGKSEVYLKDQGALDRYLVDAGLQGRILESSSGARSGEDLRAL
VDNALRLKNLIAFVPRRYDRAVIEQMALSGSLDPKLSDADRLAALEAAAARLEASDMDAK
WTVSVRESGAVLFSRLWRGVTDVHEIDGRFLSSTEAIKLHGLAAPQSDAYEGSVRLVKAG
ELTDEEPETASDDDDGEEPAAFAEDAITRPTQLLDAVLAAGRKGLSISRYKGLGEMNPEQ
LWETTLDPENRILLQVKVEDADVTDEIFTRLMGDVVEPRREFIQDNALNVANLDV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaaaaaacggtgccgattacggcgctgattccatcaaggttctcaagggcctg
gatgctgtgcgcaaacgcccgggcatgtatatcggcgacaccgatgacggatcgggcctg
caccacatggtgttcgaggtttccgacaacgccatcgacgaagcgcttgccgggcactgc
gacctcgttttgatcgaactgaacccagacggcagcgtctcggtcgaagataatggccgc
ggcattccggtcgacatgcacaaggaagaaggcgtgtcggcggcagaggtcatcatgacc
cagctgcacgccggcggtaagttcgaaaacacctcggacgacaacgcctacaaggtttca
ggcggtctgcacggcgtgggcgtttcggtggtgaacgcgctgtccgaatggctggagctt
gtcatctggcgcaatggcaaagagcactggatgcgctttgagcatggcgatgcggtgaac
agcctcgaagtgaagggcgatgcgcccaaggttgaccagaaccctgatgaagatggcttc
aagaagggtacgcgcgtcaccttcaaggcctcgaccgacacgttcaagaacgtaatcgaa
ttcgacttcgacaagcttgaacatcgctaccgcgagcttgccttcctcaattcgggcgtg
cgcattctgatccgcgaccttcgccacgaagagccgatcgaacatgacctgttctacgaa
ggcgggatcgcagctttcgtcaaatggctcgaccgcaacaaggaggcgctgatcgcagag
ccgatctcggtgtcggcggagaaggacggcatcggcatcgacgtcgctctggaatggaac
gacagctattacgagaacgtcttgtgcttcaccaacaacatcccgcaacgcgacgggggt
acgcaccttgcggccttccgcgcggcgttgaccagcacgctcaacaattatgccgaacgt
tcggggctcttgtcgaaagccaaggtttcgctttcgggtgaggacatgcgcgaagggctc
accgccatcgtcagcgtgaagctgcccgatcccaagttctcctcgcagaccaaggacaag
ctcgtctcctccgaagtgcgccagccgcttcaatcgctgatgggcgagaaaatgaacgag
tggctcgaagaaaaccccggagatgccaaggcgatcatccagaagatcgtcgatgccgcc
gccgcacgcgaagcggccaagcgcgcccgcgaaatgagccgcaagggcgcgatgagcgtc
gcctcgctgccgggcaagctgtcagactgccgcgagcgtgatgcgaccaaggccgagatt
ttcctggtcgagggcgattccgcaggcggctctgccaagggcggccgcgacagccagtat
caggcgatacttccgctgaaaggcaagatcctcaatgtcgagcgcgcgcgctttgaccgg
atcatttcctccaaggaagtcggcacgctgattcaggcaatgggcaccggcattcgcgac
gaattcgaccttgaaaagctgcgctatcacaagatcgtgatcatgaccgacgccgacgtc
gacggcgctcatatccgcacgcttttgctcaccttcttccatcgccagatgccggaaatc
gtgaaagcagggcacctgttcatcgcgcagcctccgctcttcaaggtcgcgaagggcaag
agcgaggtttacctcaaggatcagggcgcgcttgaccgctatcttgtcgatgcgggtctt
cagggccgcatactcgaatcttcaagcggtgcgcgctcgggcgaagatctgcgcgcgctt
gtcgacaatgcgctgcgcctcaagaaccttatcgccttcgttccgcgccggtatgatcgc
gcggtgatcgaacagatggcgctttccggctcgctcgaccccaagctttccgatgccgac
cggctcgcagctctcgaggccgcagcagcgcgccttgaagcgagcgatatggatgcaaag
tggacggtgtcggttcgcgaaagcggcgcggtgctgttctcgcgtttgtggcgcggcgtc
accgacgtgcatgaaatagacggacgcttcctctccagcaccgaagcgatcaagctgcac
ggcctcgccgctccgcagtccgacgcctatgaaggttcggtccgcttggtaaaggcaggc
gaattgaccgacgaagagcccgagacggcttcggacgacgatgacggcgaggagcccgcg
gcattcgccgaagatgcgatcacccgtccgacccagcttctcgacgcggtgctcgccgcc
ggtcgcaagggcctctcgatcagccgctacaagggtctgggcgagatgaacccggaacag
ctttgggaaaccacgctcgatccggaaaaccgcatcctgctgcaggtgaaggtcgaagac
gctgacgtgacggacgaaatcttcacccgactgatgggtgacgtggtcgaaccgcgccgc
gagtttattcaggataatgcactcaacgttgccaatctcgacgtgtaa
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