Erythrobacter sp. KY5: CD351_08055
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Entry
CD351_08055 CDS
T05511
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
erk
Erythrobacter sp. KY5
Brite
KEGG Orthology (KO) [BR:
erk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erk03016
]
CD351_08055 (rnd)
Enzymes [BR:
erk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CD351_08055 (rnd)
Transfer RNA biogenesis [BR:
erk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CD351_08055 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWW74377
UniProt:
A0A2Z4JZQ2
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All DBs
Position
complement(1706670..1707872)
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AA seq
400 aa
AA seq
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MKIHDLITTSDALADLCERLSQSEFVAVDTEFMRENTYWPELCLVQIANTEEAAAIDPLA
DGIDLTPLLQLLTENDEVLKVFHAGGQDVEIIVNMTGKTPFPIFDTQISMMAISQSEQIG
YANLVDHWLNITVDKGARFTDWSRRPLTDRQIEYAIGDVTHLSKIFPKILKKLMKTERGV
WLDAEMEKLADPSNYIVDPDASWKRIRQPGRNPLVLGRLKALAAWREGEAQHKNIPRGRI
MRDETLADIASHPPKKQGDLAKVRGLSASWKDNDIGKRLMRVISEAEALPKSEMPEKMKR
GAPLGKEGALVADLLKLLLKIRAREIDVASRLLTRADEMEALAAGVRDLQVLQGWRYDIF
GKDALELVEGKLAFAVREGKLTMTHIDDMQASMEEALAAE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacacgacctgatcacaacttccgacgctctggctgacctgtgcgagcgcctc
tctcaatccgaattcgttgcagtcgacaccgaattcatgcgcgaaaacacatactggcct
gaattgtgcctggtacagatcgccaacaccgaagaagccgccgcgattgatccgctggct
gacggtatcgacctcactcccctactccagctgctgaccgagaacgatgaggttctgaag
gtcttccacgctggcggtcaggacgtcgagatcatcgtcaacatgacgggcaagacgccc
ttccccattttcgacacgcaaatctcgatgatggcgatcagccagtccgaacagatcggc
tatgccaatctcgtcgatcactggctgaacatcacggttgataagggcgcgcgctttacc
gactggagccggcgtcccctcaccgatcgccagatcgaatacgctatcggcgatgtgact
cacctttcgaagatcttccccaagatcctcaaaaaactgatgaagaccgagcgcggtgtg
tggctcgatgcggagatggaaaagctggccgatccgtcgaattacatcgtcgatcccgac
gcttcgtggaaacgcatccgacagccgggccgcaatccgctcgtgctcgggcgattgaaa
gcgcttgcagcatggcgcgagggcgaggcgcagcacaagaatatcccgcgcggccgcatc
atgcgcgacgaaacgctcgctgacatcgcctctcacccgcccaagaaacagggcgatctc
gcgaaggtgcgagggctttcggcctcgtggaaggacaacgacatcggcaagcgcctgatg
agggtcatttccgaagccgaagcgctgcccaagtccgaaatgcctgaaaagatgaaacgc
ggtgcgccgctgggcaaggaaggcgcactggtggccgacttgctcaagctgctgctgaaa
atccgtgcgcgagaaatcgacgttgcctcccgccttctgacgcgagccgatgagatggaa
gcgctcgctgccggtgttcgcgaccttcaggtgctgcagggctggcgctacgatatcttc
ggcaaggatgcgctcgaactggttgaaggcaagctcgctttcgcggtcagggaaggcaaa
ctcaccatgacccatatcgacgacatgcaggcaagcatggaagaagcgctggcagcagag
tga
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