Erythrobacter sp. KY5: CD351_10875
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Entry
CD351_10875 CDS
T05511
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
erk
Erythrobacter sp. KY5
Pathway
erk03030
DNA replication
erk03430
Mismatch repair
erk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD351_10875
03430 Mismatch repair
CD351_10875
03440 Homologous recombination
CD351_10875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erk03032
]
CD351_10875
03400 DNA repair and recombination proteins [BR:
erk03400
]
CD351_10875
Enzymes [BR:
erk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD351_10875
DNA replication proteins [BR:
erk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CD351_10875
DNA repair and recombination proteins [BR:
erk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CD351_10875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
HHH_3
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
AWW74928
UniProt:
A0A2Z4K1W0
LinkDB
All DBs
Position
complement(2302392..2305889)
Genome browser
AA seq
1165 aa
AA seq
DB search
MPFAPFVPLRVLSSYSMLEGAIDPKAIAKLAKERGFPAISICDRNGLYGAVMFANACKSE
GVQPIIGTLLGVAREGSEGKLVDYLPLLAQDEAGYDNLCHLVSKAHLDRPLELEPHVVMD
DLEGHTDGLIALTGAGEGALTRLLAEGQVDTATAFVERLDKLFVNRLYIELARHGNPVCE
RAEDALIEMAYNRALPLVATNPANFAEPHMHKAHDAMLCIANSTYIENEDRPRTNQAAFV
KSSNMMEELFADLPEATANTLVIAQRCAYAPPYRDPILPSLAGDLEGEAKMLAEQSKAGL
EDRLSTYEDLSEEDRKVYFDRLDYEIDIIVGMGFPGYFLIVADFIQWAKDQGIPVGPGRG
SGAGSIVAWALTITDLDPIQLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQKKYG
HDHVAQIITFGKMKARAVLRDCGRILQMSYGQVDRLCKMVPNHPTDPWTLPRALNGAADF
KKEYDNDNEVKRLVDLALQLEGLPRNSSTHAAGVVIGDRPLAKLVPLYRDPRSDMPVTQY
DMKNVESSGLVKFDFLGLKTLSVLRKAVDLLATRGIEIDLGALPLDDTAVYDLMQMGNTV
GVFQLESEGMRRTLKAVKPSNFGDIIALVSLYRPGPMDNIPLFGQRKAGEVPIEYPHPKL
EGILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDIQRGRFVEGCKD
VSGIEAKQANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWMKAHYPEEFYAASMCFDLH
QSEKLNIFVDDARRYPAERANGSGVEVLPPDVNHSEARFTVEQTDDGYAVRYALAGIRNV
GEKAMEAIVAERRSNGPFESLKDLFERMPQGAMNRRQLEGLICAGALDGLYPNRGELFAN
ADLLLATADAAARERSSGQGGLFGGDNAPQEDLRLQPAESWSRPDQMAKERENFGFYFSA
HPVQQYREVASAQGARTYQSLMDGGAPAGRQTAVIAAMVESAGKGRTKRGAEFVRGQFSD
ASGQFSAACFEESLVSSFQNWADSGECVLLTVELDSPNPGEPPRLTVRGARPLSSVTGST
PMILKMDVTSLDGLAELKLELTQEDKALGEVLVRLILGPDEEAHVRLGSNFVLDGELAER
LAQAEGIENIALEPLRGRPNLKLVA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcgctcccttcgtccctttgcgtgttttgtcttcctattcgatgctcgaagga
gccatcgatcccaaggcgattgccaagcttgccaaggagcgcggctttcccgcgatttcg
atctgtgaccgcaatggcctgtatggcgcggtcatgttcgccaatgcctgcaaaagcgaa
ggtgtgcagccgatcatcggcacgctgctgggcgttgcgcgcgaagggtcggaaggcaag
cttgtcgattacctgccgctgctcgcgcaggatgaggcgggctatgacaatctgtgccat
ctcgtctccaaggcgcaccttgatcgcccgcttgagcttgagccgcatgtcgtcatggac
gatctggaaggtcacacagatggcctgattgcgctgaccggcgcgggcgagggcgcgctg
acccggctgctagcagaggggcaggtcgacaccgcgaccgcttttgtcgagcggctcgac
aagcttttcgtgaaccgcctttacatcgagctggcgcgccacggcaatccggtgtgcgaa
cgcgcggaagacgcgctgatcgagatggcgtataatcgcgcgctgccgcttgtcgcgacc
aatcctgcaaactttgccgaaccccatatgcacaaggcgcatgacgccatgctgtgcatc
gcaaactcgacttatatcgagaacgaagaccgcccgcgcaccaatcaggcggctttcgtc
aaatcgtcgaacatgatggaagagctgttcgcggacctgcccgaggcgaccgctaacacg
ctcgtgattgcgcaaaggtgcgcctacgcgcctccctatcgcgaccccatcctgccaagc
cttgcgggcgaccttgagggcgaggcgaagatgctggctgagcaatcgaaggcaggtctg
gaggatcggctctcaacgtatgaggacctgtccgaagaagaccggaaggtttacttcgac
cgcctcgactatgaaatcgacatcatcgtcgggatgggttttcccggatacttcctgatc
gttgccgacttcatccagtgggcgaaggatcagggcattccggtggggccgggacgcggt
tcgggcgctggctcgatcgtcgcatgggcgctcaccatcaccgacctcgatccgatccag
ctgggcctgctgttcgagcgtttcctcaaccccgaacgcgtgtcgatgcccgacttcgac
atcgacttctgcgaaacgcggcgcggcgaagtcatccgctatgtgcagaagaaatacggc
cacgatcacgtcgcgcagatcatcaccttcggcaagatgaaggcgcgcgcggttttgcgc
gattgcggacgtatcctgcagatgagctacgggcaggtggatcgcctgtgcaagatggtg
cccaaccatccgaccgatccttggacactgccgcgcgccttgaacggcgcggccgatttc
aagaaggaatatgacaacgacaacgaggtgaagcgccttgttgacctggcgcttcagctt
gaaggtctgccgcgtaactcgtcgacccacgctgcgggcgtggtcatcggggacagaccg
ctggcgaagctggtcccgctctaccgcgatccgcgttcggatatgccggtgacgcaatac
gacatgaagaatgtcgaaagctcgggcctcgtgaagttcgactttctcgggctcaaaacg
ctgtcggtgctgcgcaaggccgtggacttgctcgcgacgcgcgggattgagattgatctg
ggggcgctgcctctggatgacacggcggtctacgacctcatgcagatgggtaatacggtc
ggtgtgttccaactggaatccgaaggcatgcgccgcacactcaaggcggtgaagccatcc
aatttcggcgacatcatcgcgctcgtctcgctttatcgtccgggcccgatggacaacatc
ccgctgttcggacagcgcaaggcgggcgaggtgccgattgaatatccgcatcccaagctt
gaggggattctcgccgaaacctacggcatcttcgtctaccaggaacaggtcatgcaggcc
gcgcagatccttgcgggatactcgctcggcgatgctgacctcttgcgacgcgcaatgggt
aagaaggtccaggccgaaatggacatccagcgcggccgctttgtcgaaggctgcaaggac
gtttccggcatcgaggccaagcaggcgaacgagctgttcgacttgattgacaagttcgca
ggctacggtttcaacaaatcgcacgctgccgcctacgcgctgctcgcctatcagactgca
tggatgaaggcgcattatccggaagaattctacgccgcttcgatgtgtttcgacctgcac
cagtcggaaaagctgaacatcttcgttgatgatgcgcggcgttatccggcggagcgcgcg
aacgggtcgggcgttgaggtacttccgccagacgtcaaccattccgaagcgcgcttcacg
gtcgagcagaccgacgatggctacgcggtccgctatgcgctcgcgggcattcgcaatgtc
ggtgagaaggcgatggaggcgattgttgccgaacgccgctctaatggaccatttgagagc
ctcaaggatctgttcgagcggatgccccaaggcgcgatgaaccggcgccagctcgaaggg
ttgatctgcgcaggtgcgctagacgggctctaccccaaccggggcgagttgttcgccaat
gccgaccttctgctcgccacagccgatgcggcagcgcgtgagcggtcaagcgggcagggc
ggtctgtttggaggagacaacgcaccgcaggaagacttgcgcctgcagcctgccgaaagc
tggtcacggcccgaccagatggcgaaggagcgcgagaatttcggcttctacttctccgct
cacccggtccagcaatatcgcgaagtcgcctccgcacagggcgcgcgcacttaccagagc
ctgatggatggcggcgcgcctgctggccgtcagaccgccgtgatcgccgccatggtcgag
agcgcaggcaagggtcggaccaaacgcggcgcggaattcgtgcgcggccagttctccgac
gcatcaggccaattctcagcggcgtgttttgaagaatcgctcgtctccagcttccagaac
tgggccgatagcggcgaatgcgtgctgctgacggttgagctcgattcgcccaatccgggc
gaaccaccgcgtcttaccgtgcgcggtgcaaggccgctctcctcggtgactggcagcacg
ccgatgatcctcaagatggatgtcaccagcctggacgggctggccgaactgaagcttgag
ctgacgcaggaggacaaggctcttggcgaagtgctcgttcggctgatcctcggccctgac
gaggaggcgcatgtacggcttggctcgaacttcgtcctcgatggcgaactggcagagcgg
ctcgctcaggcagagggtatcgagaatatcgcgcttgaacccttacggggacggccgaac
ctcaagttggtggcctga
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